PDB Chemical Component Z9D

Ideal Model

Chemical Description

Name 4-deoxy-beta-D-xylo-hexopyranose
Formula C6 H12 O5
Formal charge 0
Molecular weight 164.156 g/mol
Component type D-saccharide, beta linking

Chemical features

Atom count 23
Chiral atom count 4
Chiral atoms C1 C2 C3 C5
Observed leaving atoms O1 HO1
Bond count 23
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 4-deoxy-beta-D-xylo-hexopyranose
Systematic name (OpenEye OEToolkits) (2R,3R,4S,6S)-6-(hydroxymethyl)oxane-2,3,4-triol

Chemical Descriptors

Stereo SMILES (CACTVS) OC[C@@H]1C[C@H](O)[C@@H](O)[C@H](O)O1
SMILES (CACTVS) OC[CH]1C[CH](O)[CH](O)[CH](O)O1
Stereo SMILES (OpenEye) C1[C@H](O[C@H]([C@@H]([C@H]1O)O)O)CO
InChI descriptor InChI=1S/C6H12O5/c7-2-3-1-4(8)5(9)6(10)11-3/h3-10H,1-2H2/t3-,4-,5+,6+/m0/s1
InChIKey descriptor HDEMQQHXNOJATE-UNTFVMJOSA-N

Status Information

Last modified 2020-07-17
Created 2012-12-17
Release status REL
Model PDB code 1GA8
Processing site RCSB