PDB Chemical Component VHH

Ideal Model

Chemical Description

Name 5-[(3aS,4S,6aR)-1,3-dimethyl-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoic acid
Formula C12 H20 N2 O3 S
Formal charge 0
Molecular weight 272.364 g/mol
Component type NON-POLYMER

Chemical features

Atom count 38
Chiral atom count 3
Chiral atoms C2 C4 C5
Bond count 39
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 5-[(3aS,4S,6aR)-1,3-dimethyl-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoic acid
Systematic name (OpenEye OEToolkits) 5-[(3aS,4S,6aR)-1,3-dimethyl-2-oxidanylidene-3a,4,6,6a-tetrahydrothieno[3,4-d]imidazol-4-yl]pentanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) CN1[C@H]2CS[C@@H](CCCCC(O)=O)[C@H]2N(C)C1=O
SMILES (CACTVS) CN1[CH]2CS[CH](CCCCC(O)=O)[CH]2N(C)C1=O
Stereo SMILES (OpenEye) CN1[C@H]2CS[C@H]([C@H]2N(C1=O)C)CCCCC(=O)O
InChI descriptor InChI=1S/C12H20N2O3S/c1-13-8-7-18-9(5-3-4-6-10(15)16)11(8)14(2)12(13)17/h8-9,11H,3-7H2,1-2H3,(H,15,16)/t8-,9-,11-/m0/s1
InChIKey descriptor PECDAVNFXWSGFV-QXEWZRGKSA-N

Status Information

Last modified 2011-12-23
Created 2011-09-09
Release status REL
Model PDB code 3VHH
Processing site PDBJ