PDB Chemical Component UCG

Ideal Model

Chemical Description

Name 3'-O-[(R)-{[(2R,3aR,4R,6R,6aR)-6-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-2-hydroxy-2-oxidotetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-4-yl]methoxy}(hydroxy)phosphoryl]uridine 5'-(dihydrogen phosphate)
Formula C19 H24 N7 O18 P3
Formal charge 0
Molecular weight 731.351 g/mol
Component type NON-POLYMER

Chemical features

Atom count 71
Chiral atom count 8
Chiral atoms C C1 C3 C2 C17 C16 C15 C14
Bond count 76
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 3'-O-[(R)-{[(2R,3aR,4R,6R,6aR)-6-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-2-hydroxy-2-oxidotetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-4-yl]methoxy}(hydroxy)phosphoryl]uridine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(3aR,4R,6R,6aR)-4-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-2-oxidanyl-2-oxidanylidene-3a,4,6,6a-tetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-6-yl]methyl [(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-4-oxidanyl-2-(phosphonooxymethyl)oxolan-3-yl] hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P](O)(=O)O[C@H]4[C@@H](O)[C@@H](O[C@@H]4CO[P](O)(O)=O)N5C=CC(=O)NC5=O)[C@H]6O[P](O)(=O)O[C@@H]36
SMILES (CACTVS) NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[CH]4[CH](O)[CH](O[CH]4CO[P](O)(O)=O)N5C=CC(=O)NC5=O)[CH]6O[P](O)(=O)O[CH]36
Stereo SMILES (OpenEye) c1nc2c(n1[C@H]3[C@H]4[C@@H]([C@H](O3)COP(=O)(O)O[C@@H]5[C@H](O[C@H]([C@@H]5O)N6C=CC(=O)NC6=O)COP(=O)(O)O)OP(=O)(O4)O)N=C(NC2=O)N
InChI descriptor InChI=1S/C19H24N7O18P3/c20-18-23-14-9(15(29)24-18)21-5-26(14)17-13-12(43-47(36,37)44-13)7(41-17)4-39-46(34,35)42-11-6(3-38-45(31,32)33)40-16(10(11)28)25-2-1-8(27)22-19(25)30/h1-2,5-7,10-13,16-17,28H,3-4H2,(H,34,35)(H,36,37)(H,22,27,30)(H2,31,32,33)(H3,20,23,24,29)/t6-,7-,10-,11-,12-,13-,16-,17-/m1/s1
InChIKey descriptor UIVVUPHFWRPLKC-VMIOUTBZSA-N

Status Information

Last modified 2015-01-09
Created 2014-08-19
Release status REL
Model PDB code 4R07
Processing site PDBJ