PDB Chemical Component TKW

Ideal Model

Chemical Description

Name 5-hydroxycytidine 5'-(dihydrogen phosphate)
Formula C9 H14 N3 O9 P
Formal charge 0
Molecular weight 339.196 g/mol
Component type NON-POLYMER

Chemical features

Atom count 36
Chiral atom count 4
Chiral atoms C4' C3' C2' C1'
Bond count 37
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 5-hydroxycytidine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-(4-azanyl-5-oxidanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=NC(=O)N(C=C1O)[C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]2O
SMILES (CACTVS) NC1=NC(=O)N(C=C1O)[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O
Stereo SMILES (OpenEye) C1=C(C(=NC(=O)N1[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O)N)O
InChI descriptor InChI=1S/C9H14N3O9P/c10-7-3(13)1-12(9(16)11-7)8-6(15)5(14)4(21-8)2-20-22(17,18)19/h1,4-6,8,13-15H,2H2,(H2,10,11,16)(H2,17,18,19)/t4-,5-,6-,8-/m1/s1
InChIKey descriptor QONOHPMEMVHOPP-UAKXSSHOSA-N

Status Information

Last modified 2012-11-09
Created 2012-10-18
Release status REL
Model PDB code 4HKP
Processing site RCSB