PDB Chemical Component SLM

Ideal Model

Chemical Description

Name (2S,4S,5R,6R)-5-acetamido-2,4-dihydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]oxane-2-carboxamide
Synonyms SIALYLAMIDE
Formula C11 H20 N2 O8
Formal charge 0
Molecular weight 308.285 g/mol
Component type D-saccharide, beta linking

Chemical features

Atom count 41
Chiral atom count 6
Chiral atoms C2 C4 C5 C6 C7 C8
Observed leaving atoms O2 HO2 HO4 HO7 HO8 HO9
Bond count 41
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) (2S,4S,5R,6R)-5-(acetylamino)-2,4-dihydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]tetrahydro-2H-pyran-2-carboxamide (non-preferred name)
Systematic name (OpenEye OEToolkits) (2S,4S,5R,6R)-5-acetamido-2,4-dihydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]oxane-2-carboxamide

Chemical Descriptors

Stereo SMILES (CACTVS) CC(=O)N[C@@H]1[C@@H](O)C[C@](O)(O[C@H]1[C@H](O)[C@H](O)CO)C(N)=O
SMILES (CACTVS) CC(=O)N[CH]1[CH](O)C[C](O)(O[CH]1[CH](O)[CH](O)CO)C(N)=O
Stereo SMILES (OpenEye) CC(=O)N[C@@H]1[C@H](C[C@](O[C@H]1[C@@H]([C@@H](CO)O)O)(C(=O)N)O)O
InChI descriptor InChI=1S/C11H20N2O8/c1-4(15)13-7-5(16)2-11(20,10(12)19)21-9(7)8(18)6(17)3-14/h5-9,14,16-18,20H,2-3H2,1H3,(H2,12,19)(H,13,15)/t5-,6+,7+,8+,9+,11-/m0/s1
InChIKey descriptor PKSULYZGXFBQIQ-PFQGKNLYSA-N

Status Information

Last modified 2020-07-17
Created 2010-11-04
Release status REL
Model PDB code 2XWO
Processing site EBI