PDB Chemical Component MGV

Ideal Model

Chemical Description

Name P-FLUORO-7-BENZYL GUANINE MONOPHOSPHATE
Formula C17 H20 F N5 O8 P
Formal charge 1
Molecular weight 472.342 g/mol
Component type RNA LINKING
Nonstandard Parent Id G

Chemical features

Atom count 52
Chiral atom count 4
Chiral atoms C1' C2' C3' C4'
Observed leaving atoms OP3 HO3'
Bond count 55
Aromatic bond count 11

Chemical Identifiers

Systematic name (ACDLabs) 7-(4-fluorobenzyl)guanosine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-[2-amino-7-[(4-fluorophenyl)methyl]-6-oxo-1H-purin-7-ium-9-yl]-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=Nc2n(c[n+](Cc3ccc(F)cc3)c2C(=O)N1)[C@@H]4O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]4O
SMILES (CACTVS) NC1=Nc2n(c[n+](Cc3ccc(F)cc3)c2C(=O)N1)[CH]4O[CH](CO[P](O)(O)=O)[CH](O)[CH]4O
Stereo SMILES (OpenEye) c1cc(ccc1C[n+]2cn(c3c2C(=O)NC(=N3)N)[C@H]4[C@@H]([C@@H]([C@H](O4)COP(=O)(O)O)O)O)F
InChI descriptor InChI=1S/C17H19FN5O8P/c18-9-3-1-8(2-4-9)5-22-7-23(14-11(22)15(26)21-17(19)20-14)16-13(25)12(24)10(31-16)6-30-32(27,28)29/h1-4,7,10,12-13,16,24-25H,5-6H2,(H4-,19,20,21,26,27,28,29)/p+1/t10-,12-,13-,16-/m1/s1
InChIKey descriptor VLABRVWLURSKLS-XNIJJKJLSA-O

Status Information

Last modified 2011-06-04
Created 2007-08-16
Release status REL
Model PDB code 2V8Y
Processing site RCSB