PDB Chemical Component LN5

Ideal Model

Chemical Description

Name N5-(1-iminopropyl)-L-ornithine
Synonyms (2S)-2-azanyl-5-(propanimidoylamino)pentanoic acid
Formula C8 H17 N3 O2
Formal charge 0
Molecular weight 187.239 g/mol
Component type NON-POLYMER

Chemical features

Atom count 30
Chiral atom count 1
Chiral atoms CA
Bond count 29
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) N~5~-[(1Z)-propanimidoyl]-L-ornithine
Systematic name (OpenEye OEToolkits) (2S)-2-amino-5-(propanimidoylamino)pentanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) CCC(=N)NCCC[C@H](N)C(O)=O
SMILES (CACTVS) CCC(=N)NCCC[CH](N)C(O)=O
Stereo SMILES (OpenEye) [H]/N=C(/CC)\NCCC[C@@H](C(=O)O)N
InChI descriptor InChI=1S/C8H17N3O2/c1-2-7(10)11-5-3-4-6(9)8(12)13/h6H,2-5,9H2,1H3,(H2,10,11)(H,12,13)/t6-/m0/s1
InChIKey descriptor ZYIBCZWVLDODOL-LURJTMIESA-N

Status Information

Last modified 2021-03-01
Created 2009-07-07
Release status REL
Model PDB code 3I4A
Processing site RCSB