PDB Chemical Component KD5

Ideal Model

Chemical Description

Name 4,7-anhydro-3-deoxy-D-manno-oct-2-ulosonic acid
Formula C8 H12 O7
Formal charge 0
Molecular weight 220.177 g/mol
Component type D-saccharide

Chemical features

Atom count 27
Chiral atom count 4
Chiral atoms C4 C5 C6 C7
Observed leaving atoms O5 HO5
Bond count 27
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 4,7-anhydro-3-deoxy-D-manno-oct-2-ulosonic acid
Systematic name (OpenEye OEToolkits) 3-[(2R,3S,4S,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-2-oxidanylidene-propanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) OC[C@H]1O[C@H](CC(=O)C(O)=O)[C@@H](O)[C@@H]1O
SMILES (CACTVS) OC[CH]1O[CH](CC(=O)C(O)=O)[CH](O)[CH]1O
Stereo SMILES (OpenEye) C([C@@H]1[C@H]([C@@H]([C@H](O1)CO)O)O)C(=O)C(=O)O
InChI descriptor InChI=1S/C8H12O7/c9-2-5-7(12)6(11)4(15-5)1-3(10)8(13)14/h4-7,9,11-12H,1-2H2,(H,13,14)/t4?,5-,6-,7-/m1/s1
InChIKey descriptor HVHHMEMCULPBED-UVSCYPECSA-N

Status Information

Last modified 2020-07-17
Created 2012-03-22
Release status REL
Model PDB code 4E52
Processing site RCSB