PDB Chemical Component GAO

Ideal Model

Chemical Description

Name GUANINE ARABINOSE-5'-PHOSPHATE
Formula C10 H14 N5 O8 P
Formal charge 0
Molecular weight 363.221 g/mol
Component type RNA LINKING
Nonstandard Parent Id G

Chemical features

Atom count 38
Chiral atom count 4
Chiral atoms C4' C3' C2' C1'
Observed leaving atoms OP3 HO3'
Bond count 40
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 2-amino-9-(5-O-phosphono-beta-D-arabinofuranosyl)-1,9-dihydro-6H-purin-6-one
Systematic name (OpenEye OEToolkits) [(2R,3S,4S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H]3O
SMILES (CACTVS) NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
Stereo SMILES (OpenEye) c1nc2c(n1[C@H]3[C@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N=C(NC2=O)N
InChI descriptor InChI=1S/C10H14N5O8P/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(23-9)1-22-24(19,20)21/h2-3,5-6,9,16-17H,1H2,(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6+,9-/m1/s1
InChIKey descriptor RQFCJASXJCIDSX-FJFJXFQQSA-N

Status Information

Last modified 2011-06-04
Created 2000-12-18
Release status REL
Model PDB code 1HO6
Processing site EBI