PDB Chemical Component F6G

Ideal Model

Chemical Description

Name 6-amino-3-{2-deoxy-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-3,4-dihydro-1,3,5-triazin-2(1H)-one
Formula C8 H17 N4 O13 P3
Formal charge 0
Molecular weight 470.161 g/mol
Component type NON-POLYMER

Chemical features

Atom count 45
Chiral atom count 3
Chiral atoms C1' C3' C4'
Bond count 46
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 6-amino-3-{2-deoxy-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-3,4-dihydro-1,3,5-triazin-2(1H)-one
Systematic name (OpenEye OEToolkits) [[(2~{R},3~{S},5~{R})-5-(6-azanyl-2-oxidanylidene-1,4-dihydro-1,3,5-triazin-3-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=NCN([C@H]2C[C@H](O)[C@@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)O2)C(=O)N1
SMILES (CACTVS) NC1=NCN([CH]2C[CH](O)[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)O2)C(=O)N1
Stereo SMILES (OpenEye) C1[C@@H]([C@H](O[C@H]1N2CN=C(NC2=O)N)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O
InChI descriptor InChI=1S/C8H17N4O13P3/c9-7-10-3-12(8(14)11-7)6-1-4(13)5(23-6)2-22-27(18,19)25-28(20,21)24-26(15,16)17/h4-6,13H,1-3H2,(H,18,19)(H,20,21)(H2,15,16,17)(H3,9,10,11,14)/t4-,5+,6+/m0/s1
InChIKey descriptor YEGZZVDXUFGWTE-KVQBGUIXSA-N

Status Information

Last modified 2019-06-14
Created 2018-03-05
Release status REL
Model PDB code 6CM2
Processing site RCSB