PDB Chemical Component EEM

Ideal Model

Chemical Description

Name [(3S)-3-amino-4-hydroxy-4-oxo-butyl]-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl]-methyl-selanium
Synonyms Se-ADENOSYLSELENOMETHIONINE
Formula C15 H23 N6 O5 Se
Formal charge 1
Molecular weight 446.340 g/mol
Component type NON-POLYMER

Chemical features

Atom count 50
Chiral atom count 6
Chiral atoms C1' C2' C3' C4' CA SE
Bond count 52
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) [(3S)-3-amino-3-carboxypropyl]{[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}methylselenonium (non-preferred name)
Systematic name (OpenEye OEToolkits) [(3S)-3-amino-4-hydroxy-4-oxo-butyl]-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl]-methyl-selanium

Chemical Descriptors

Stereo SMILES (CACTVS) C[Se@@+](CC[C@H](N)C(O)=O)C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23
SMILES (CACTVS) C[Se+](CC[CH](N)C(O)=O)C[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23
Stereo SMILES (OpenEye) C[Se@@+](CC[C@@H](C(=O)O)N)C[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O
InChI descriptor InChI=1S/C15H22N6O5Se/c1-27(3-2-7(16)15(24)25)4-8-10(22)11(23)14(26-8)21-6-20-9-12(17)18-5-19-13(9)21/h5-8,10-11,14,22-23H,2-4,16H2,1H3,(H2-,17,18,19,24,25)/p+1/t7-,8+,10+,11+,14+,27-/m0/s1
InChIKey descriptor GGJFWMOVUFBSIN-FCKMPRQPSA-O

Status Information

Last modified 2021-03-01
Created 2008-09-03
Release status REL
Model PDB code 3E5F
Processing site RCSB