PDB Chemical Component DJN

Ideal Model

Chemical Description

Name N-[(3S,4R,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin-3-yl]acetamide
Synonyms 2-acetamido-1,2-dideoxy-D-galacto-nojirimycin; DGJNAc
Formula C8 H16 N2 O4
Formal charge 0
Molecular weight 204.224 g/mol
Component type NON-POLYMER

Chemical features

Atom count 30
Chiral atom count 4
Chiral atoms C2 C3 C4 C5
Bond count 30
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) N-[(3S,4R,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin-3-yl]acetamide
Systematic name (OpenEye OEToolkits) N-[(3S,4R,5S,6R)-6-(hydroxymethyl)-4,5-bis(oxidanyl)piperidin-3-yl]ethanamide

Chemical Descriptors

Stereo SMILES (CACTVS) CC(=O)N[C@H]1CN[C@H](CO)[C@H](O)[C@@H]1O
SMILES (CACTVS) CC(=O)N[CH]1CN[CH](CO)[CH](O)[CH]1O
Stereo SMILES (OpenEye) CC(=O)N[C@H]1CN[C@@H]([C@@H]([C@@H]1O)O)CO
InChI descriptor InChI=1S/C8H16N2O4/c1-4(12)10-5-2-9-6(3-11)8(14)7(5)13/h5-9,11,13-14H,2-3H2,1H3,(H,10,12)/t5-,6+,7+,8-/m0/s1
InChIKey descriptor GBRAQQUMMCVTAV-OSMVPFSASA-N

Status Information

Last modified 2020-05-27
Created 2012-02-14
Release status REL
Model PDB code 4DO4
Processing site RCSB