PDB Chemical Component CG1

Ideal Model

Chemical Description

Name 5'-O-[(R)-hydroxy(methoxy)phosphoryl]guanosine
Formula C11 H16 N5 O8 P
Formal charge 0
Molecular weight 377.247 g/mol
Component type RNA linking
Nonstandard Parent Id G

Chemical features

Atom count 41
Chiral atom count 5
Chiral atoms P C4' C3' C2' C1'
Bond count 43
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 5'-O-[(R)-hydroxy(methoxy)phosphoryl]guanosine
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl methyl hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) CO[P@](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3C(=O)NC(=Nc23)N
SMILES (CACTVS) CO[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3C(=O)NC(=Nc23)N
Stereo SMILES (OpenEye) CO[P@@](=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2N=C(NC3=O)N)O)O
InChI descriptor InChI=1S/C11H16N5O8P/c1-22-25(20,21)23-2-4-6(17)7(18)10(24-4)16-3-13-5-8(16)14-11(12)15-9(5)19/h3-4,6-7,10,17-18H,2H2,1H3,(H,20,21)(H3,12,14,15,19)/t4-,6-,7-,10-/m1/s1
InChIKey descriptor CTLHMSXPFVHJEK-KQYNXXCUSA-N

Status Information

Last modified 2011-06-04
Created 2008-03-26
Release status REL
Model PDB code 1F6U
Processing site RCSB