PDB Chemical Component BTD

Ideal Model

Chemical Description

Name 5-BROMOTHIENYLDEOXYURIDINE
Formula C13 H13 Br N2 O5 S
Formal charge 0
Molecular weight 389.222 g/mol
Component type NON-POLYMER

Chemical features

Atom count 35
Chiral atom count 3
Chiral atoms C4' C1' C3'
Bond count 37
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 5-(5-bromothiophen-2-yl)-2'-deoxyuridine
Systematic name (OpenEye OEToolkits) 5-(5-bromothiophen-2-yl)-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione

Chemical Descriptors

Stereo SMILES (CACTVS) OC[C@H]1O[C@H](C[C@@H]1O)N2C=C(C(=O)NC2=O)c3sc(Br)cc3
SMILES (CACTVS) OC[CH]1O[CH](C[CH]1O)N2C=C(C(=O)NC2=O)c3sc(Br)cc3
Stereo SMILES (OpenEye) c1cc(sc1C2=CN(C(=O)NC2=O)[C@H]3C[C@@H]([C@H](O3)CO)O)Br
InChI descriptor InChI=1S/C13H13BrN2O5S/c14-10-2-1-9(22-10)6-4-16(13(20)15-12(6)19)11-3-7(18)8(5-17)21-11/h1-2,4,7-8,11,17-18H,3,5H2,(H,15,19,20)/t7-,8+,11+/m0/s1
InChIKey descriptor IGUZFFOBAZCVRK-VAOFZXAKSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1KI4
Processing site RCSB