PDB Chemical Component A44

Ideal Model

Chemical Description

Name 2'-O-METHYOXYETHYL-ADENOSINE 5'-MONOPHOSPHATE
Formula C13 H20 N5 O8 P
Formal charge 0
Molecular weight 405.300 g/mol
Component type RNA LINKING
Nonstandard Parent Id A

Chemical features

Atom count 47
Chiral atom count 4
Chiral atoms C4' C3' C2' C1'
Observed leaving atoms OP3 HO3' HOP3
Bond count 49
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 2'-O-(2-methoxyethyl)adenosine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-4-(2-methoxyethoxy)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) COCCO[C@@H]1[C@H](O)[C@@H](CO[P](O)(O)=O)O[C@H]1n2cnc3c(N)ncnc23
SMILES (CACTVS) COCCO[CH]1[CH](O)[CH](CO[P](O)(O)=O)O[CH]1n2cnc3c(N)ncnc23
Stereo SMILES (OpenEye) COCCO[C@@H]1[C@@H]([C@H](O[C@H]1n2cnc3c2ncnc3N)COP(=O)(O)O)O
InChI descriptor InChI=1S/C13H20N5O8P/c1-23-2-3-24-10-9(19)7(4-25-27(20,21)22)26-13(10)18-6-17-8-11(14)15-5-16-12(8)18/h5-7,9-10,13,19H,2-4H2,1H3,(H2,14,15,16)(H2,20,21,22)/t7-,9-,10-,13-/m1/s1
InChIKey descriptor SZPMFMOOEUYAMU-QYVSTXNMSA-N

Status Information

Last modified 2013-01-10
Created 1999-05-12
Release status REL
Model PDB code 468D
Processing site RCSB