PDB Chemical Component 8MG

Ideal Model

Chemical Description

Name 8-METHYL-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
Formula C11 H16 N5 O7 P
Formal charge 0
Molecular weight 361.248 g/mol
Component type DNA LINKING
Nonstandard Parent Id DG

Chemical features

Atom count 40
Chiral atom count 3
Chiral atoms C4' C1' C3'
Observed leaving atoms OP3 HO3'
Bond count 42
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 2'-deoxy-8-methylguanosine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-5-(2-amino-8-methyl-6-oxo-1H-purin-9-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) Cc1nc2C(=O)NC(=Nc2n1[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3)N
SMILES (CACTVS) Cc1nc2C(=O)NC(=Nc2n1[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3)N
Stereo SMILES (OpenEye) Cc1nc2c(n1[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O)N=C(NC2=O)N
InChI descriptor InChI=1S/C11H16N5O7P/c1-4-13-8-9(14-11(12)15-10(8)18)16(4)7-2-5(17)6(23-7)3-22-24(19,20)21/h5-7,17H,2-3H2,1H3,(H2,19,20,21)(H3,12,14,15,18)/t5-,6+,7+/m0/s1
InChIKey descriptor MKPWVGWAKMPLFJ-RRKCRQDMSA-N

Status Information

Last modified 2011-06-04
Created 2003-10-08
Release status REL
Model PDB code 1R4D
Processing site RCSB