PDB Chemical Component 847

Ideal Model

Chemical Description

Name 2-(3-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}-5-BROMO-4-OXIDOPHENYL)SUCCINATE
Synonyms CRA_16847
Formula C18 H13 Br N4 O5
Formal charge -2
Molecular weight 445.224 g/mol
Component type NON-POLYMER

Chemical features

Atom count 41
Chiral atom count 1
Chiral atoms CVX
Bond count 43
Aromatic bond count 17

Chemical Identifiers

Systematic name (ACDLabs) (2R)-2-(3-{5-[amino(iminio)methyl]-1H-benzimidazol-2-yl}-5-bromo-4-oxidophenyl)butanedioate
Systematic name (OpenEye OEToolkits) (2R)-2-[3-[5-(amino-azaniumylidene-methyl)-1H-benzimidazol-2-yl]-5-bromo-4-oxido-phenyl]butanedioate

Chemical Descriptors

Stereo SMILES (CACTVS) NC(=[NH2+])c1ccc2[nH]c(nc2c1)c3cc(cc(Br)c3[O-])[C@@H](CC([O-])=O)C([O-])=O
SMILES (CACTVS) NC(=[NH2+])c1ccc2[nH]c(nc2c1)c3cc(cc(Br)c3[O-])[CH](CC([O-])=O)C([O-])=O
Stereo SMILES (OpenEye) c1cc2c(cc1C(=[NH2+])N)nc([nH]2)c3cc(cc(c3[O-])Br)[C@@H](CC(=O)[O-])C(=O)[O-]
InChI descriptor InChI=1S/C18H15BrN4O5/c19-11-4-8(9(18(27)28)6-14(24)25)3-10(15(11)26)17-22-12-2-1-7(16(20)21)5-13(12)23-17/h1-5,9,26H,6H2,(H3,20,21)(H,22,23)(H,24,25)(H,27,28)/p-2/t9-/m1/s1
InChIKey descriptor SJMNJNRKVVVGRB-SECBINFHSA-L

Status Information

Last modified 2020-06-17
Created 2003-03-14
Release status REL
Model PDB code 1O2Y
Processing site RCSB