PDB Chemical Component 847

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 847

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.434 1.401
C1 C6 1.432 1.390
C1 C7 1.411 1.479
C2 C3 1.398 1.365
C2 HC2 1.078 1.080
C3 C4 1.370 1.389
C3 HC3 1.082 1.081
C4 C5 1.334 1.408
C4 N3 1.289 1.379
C5 C6 1.394 1.395
C5 N4 1.329 1.357
C6 HC6 1.082 1.080
C7 N1 1.313 1.332
C7 N2 1.318 1.332
N1 HH11 1.012 0.970
N1 HH12 0.998 0.970
N2 HH21 1.009 0.970
N2 HH22 0.998 0.970
N3 C8 1.303 1.370
N3 HN3 0.983 0.970
N4 C8 1.335 1.311
C8 C1' 1.419 1.477
C1' C2' 1.417 1.397
C1' C6' 1.428 1.399
C2' C3' 1.422 1.378
C2' HC2' 1.087 1.079
C3' CVX 1.576 1.507
C3' C4' 1.403 1.385
CVX CWX 1.585 1.507
CVX C6X 1.671 1.530
CVX H31B 1.079 1.090
CWX OXX 1.219 1.221
CWX OYX 1.216 1.220
C6X C7X 1.605 1.507
C6X H42A 1.076 1.089
C6X H42B 1.080 1.090
C7X O8X 1.216 1.275
C7X O9X 1.224 1.276
C4' C5' 1.399 1.382
C4' HC4' 1.076 1.080
C5' C6' 1.399 1.387
C5' BR5' 1.972 1.892
C6' O6' 1.373 1.358

Bond Angles for 847

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 116.6 120.2
C2 C1 C7 120.5 119.9
C1 C2 C3 122.7 120.4
C1 C2 HC2 119.4 119.8
C6 C1 C7 122.9 119.9
C1 C6 C5 118.4 119.5
C1 C6 HC6 121.2 120.3
C1 C7 N1 120.1 120.0
C1 C7 N2 119.9 120.0
C3 C2 HC2 118.0 119.8
C2 C3 C4 116.6 120.2
C2 C3 HC3 121.7 119.8
C4 C3 HC3 121.6 119.9
C3 C4 C5 123.6 120.1
C3 C4 N3 130.0 133.7
C5 C4 N3 106.4 106.1
C4 C5 C6 122.0 119.5
C4 C5 N4 113.0 107.2
C4 N3 C8 106.5 107.3
C4 N3 HN3 128.7 126.3
C6 C5 N4 124.9 133.3
C5 C6 HC6 120.4 120.2
C5 N4 C8 99.7 109.6
N1 C7 N2 120.0 120.0
C7 N1 HH11 119.3 120.0
C7 N1 HH12 125.6 120.0
C7 N2 HH21 119.9 120.0
C7 N2 HH22 123.6 120.0
HH11 N1 HH12 115.1 120.0
HH21 N2 HH22 116.5 120.0
C8 N3 HN3 124.7 126.4
N3 C8 N4 114.4 109.8
N3 C8 C1' 121.9 125.1
N4 C8 C1' 123.7 125.1
C8 C1' C2' 123.2 120.1
C8 C1' C6' 120.9 120.2
C2' C1' C6' 115.9 119.7
C1' C2' C3' 122.9 119.9
C1' C2' HC2' 118.1 120.0
C1' C6' C5' 122.7 119.7
C1' C6' O6' 120.7 120.2
C3' C2' HC2' 118.9 120.1
C2' C3' CVX 120.4 119.8
C2' C3' C4' 117.7 120.3
CVX C3' C4' 121.9 119.9
C3' CVX CWX 103.6 109.4
C3' CVX C6X 114.3 109.5
C3' CVX H31B 108.7 109.5
C3' C4' C5' 121.9 120.3
C3' C4' HC4' 120.3 119.8
CWX CVX C6X 115.4 109.5
CWX CVX H31B 107.1 109.5
CVX CWX OXX 117.0 119.9
CVX CWX OYX 120.4 120.0
C6X CVX H31B 107.3 109.5
CVX C6X C7X 118.9 109.4
CVX C6X H42A 109.7 109.4
CVX C6X H42B 108.7 109.5
OXX CWX OYX 122.6 120.0
C7X C6X H42A 105.2 109.5
C7X C6X H42B 108.0 109.5
C6X C7X O8X 121.8 120.0
C6X C7X O9X 119.5 120.0
H42A C6X H42B 105.5 109.5
O8X C7X O9X 118.8 120.0
C5' C4' HC4' 117.7 119.9
C4' C5' C6' 118.8 120.1
C4' C5' BR5' 121.6 119.9
C6' C5' BR5' 119.6 120.0
C5' C6' O6' 116.6 120.1

Torsion Angles for 847

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 C7 180.2 180.3
C2 C1 C6 C5 0.2 359.5
C2 C1 C6 HC6 179.6 179.7
C2 C1 C7 N1 175.9 180.0
C2 C1 C7 N2 356.9 360.0
C3 C2 C1 HC2 179.9 180.0
C1 C2 C3 C4 0.4 0.0
C1 C2 C3 HC3 179.6 180.0
C2 C1 C6 C7 179.8 179.7
C6 C1 C2 C3 359.7 0.2
C6 C1 C2 HC2 179.9 180.2
C6 C1 C7 N1 355.7 359.7
C6 C1 C7 N2 176.6 179.7
C4 C5 C6 C1 359.7 0.5
C1 C6 C5 N4 179.9 180.1
C5 C6 C1 HC6 180.6 179.8
C2 C1 C7 C6 180.2 180.3
C7 C1 C2 C3 179.5 180.0
C7 C1 C2 HC2 359.6 360.0
C7 C1 C6 C5 180.4 179.7
C7 C1 C6 HC6 359.8 360.0
N1 C7 C1 N2 179.0 180.0
C1 C7 N1 HH11 359.1 180.0
C1 C7 N1 HH12 180.9 360.0
C1 C7 N2 HH21 359.3 360.0
C1 C7 N2 HH22 177.5 179.8
C3 C2 C1 C6 359.7 0.2
C3 C2 C1 C7 179.5 180.0
C1 C2 C3 HC2 180.1 180.0
C4 C3 C2 HC3 180.9 180.1
C2 C3 C4 C5 359.5 360.0
C2 C3 C4 N3 179.3 180.0
HC2 C2 C1 C6 179.9 180.2
HC2 C2 C1 C7 359.6 360.0
C1 C2 HC2 C3 179.9 180.0
HC2 C2 C3 C4 180.3 180.0
HC2 C2 C3 HC3 359.4 360.0
C4 C3 C2 HC2 180.3 180.0
C2 C3 C4 HC3 179.1 179.9
C5 C4 C3 N3 180.1 180.0
C3 C4 C5 C6 0.5 359.8
C3 C4 C5 N4 180.3 180.0
C3 C4 N3 C8 180.0 180.0
C3 C4 N3 HN3 2.4 0.0
HC3 C3 C2 HC2 359.4 360.0
C2 C3 HC3 C4 180.9 180.1
HC3 C3 C4 C5 180.3 180.0
HC3 C3 C4 N3 0.2 0.1
C1 C6 C5 C4 359.7 0.5
C5 C4 C3 HC3 180.3 180.0
C3 C4 C5 N3 179.9 180.0
C5 C4 N3 C8 359.8 360.0
C5 C4 N3 HN3 182.3 180.0
C6 C5 C4 N4 180.2 179.7
C4 C5 C6 HC6 180.3 180.3
C4 C5 N4 C8 359.5 360.0
N3 C4 C3 HC3 0.2 0.1
C3 C4 N3 C5 180.1 180.0
N3 C4 C5 C6 180.6 179.7
N3 C4 C5 N4 0.4 0.0
C8 N3 C4 HN3 177.5 180.0
C4 N3 C8 N4 359.8 360.0
C4 N3 C8 C1' 179.8 180.0
C5 C6 C1 C7 180.4 179.7
C1 C6 C5 HC6 179.4 180.2
C6 C5 C4 N3 180.6 179.7
C4 C5 C6 N4 179.8 180.4
C6 C5 N4 C8 179.3 180.3
N4 C5 C4 N3 0.4 0.0
C4 C5 N4 C6 180.2 179.7
N4 C5 C6 HC6 0.5 359.9
N3 C8 N4 C5 0.4 0.0
C5 N4 C8 C1' 180.5 180.0
HC6 C6 C1 C7 359.8 360.0
C1 C6 HC6 C5 180.6 179.8
HC6 C6 C5 N4 0.5 359.9
C1 C7 N1 N2 181.0 180.0
N1 C7 N2 HH21 180.3 180.0
N1 C7 N2 HH22 358.5 359.8
HH11 N1 C7 HH12 178.2 180.0
C1 C7 N2 N1 179.0 180.0
N2 C7 N1 HH11 178.1 360.0
N2 C7 N1 HH12 359.9 180.0
HH21 N2 C7 HH22 181.8 180.2
HH11 N1 C7 N2 178.1 360.0
C7 N1 HH11 HH12 181.6 180.0
HH12 N1 C7 N2 359.9 180.0
C7 N1 HH12 HH11 178.3 180.0
C7 N2 HH21 HH22 178.3 179.8
C7 N2 HH22 HH21 181.7 180.2
C4 N3 C8 HN3 182.3 180.0
C5 N4 C8 N3 0.4 0.0
N4 C8 N3 C1' 180.1 180.0
N3 C8 C1' C2' 184.8 140.3
N3 C8 C1' C6' 4.1 320.0
C4 N3 HN3 C8 177.1 179.9
HN3 N3 C8 N4 177.5 179.9
HN3 N3 C8 C1' 357.4 359.9
N4 C8 N3 HN3 177.5 179.9
N3 C8 N4 C1' 179.9 180.0
N4 C8 C1' C2' 4.7 320.3
N4 C8 C1' C6' 184.0 140.0
C1' C8 N3 HN3 357.4 359.9
N3 C8 C1' N4 180.1 180.0
C2' C1' C8 C6' 180.7 180.2
C8 C1' C2' C3' 179.3 180.0
C8 C1' C2' HC2' 0.1 360.0
C8 C1' C6' C5' 181.0 179.7
C8 C1' C6' O6' 1.0 0.3
C8 C1' C2' C6' 179.3 179.8
C2' C1' C6' C5' 0.3 359.5
C2' C1' C6' O6' 180.3 180.0
C3' C2' C1' HC2' 179.2 180.0
C1' C2' C3' CVX 178.7 180.0
C1' C2' C3' C4' 359.9 360.0
C8 C1' C6' C2' 180.7 180.2
C6' C1' C2' C3' 0.0 0.2
C6' C1' C2' HC2' 180.8 180.2
C4' C5' C6' C1' 359.4 0.5
C1' C6' C5' BR5' 177.7 180.2
C5' C6' C1' O6' 180.0 179.5
C3' C2' C1' C6' 0.0 0.2
C1' C2' C3' HC2' 180.8 180.0
CVX C3' C2' C4' 178.9 180.0
C2' C3' CVX CWX 286.0 240.0
C2' C3' CVX C6X 159.6 120.0
C2' C3' CVX H31B 39.7 359.9
C2' C3' C4' C5' 359.9 0.0
C2' C3' C4' HC4' 178.6 180.0
HC2' C2' C1' C6' 180.8 180.2
C1' C2' HC2' C3' 179.2 180.0
HC2' C2' C3' CVX 358.0 0.0
HC2' C2' C3' C4' 179.1 180.0
CVX C3' C2' HC2' 358.0 0.0
C2' C3' CVX C4' 181.2 180.0
CVX C3' C4' C5' 181.0 180.0
CVX C3' C4' HC4' 359.7 360.0
CWX CVX C3' C6X 126.4 120.0
CWX CVX C3' H31B 246.3 240.0
C3' CVX CWX OXX 106.0 120.0
C3' CVX CWX OYX 287.0 300.0
C6X CVX C3' H31B 119.9 120.1
C3' CVX C6X C7X 251.7 185.0
C3' CVX C6X H42A 12.7 305.0
C3' CVX C6X H42B 127.7 65.0
C4' C3' C2' HC2' 179.1 180.0
C2' C3' C4' CVX 178.9 180.0
C4' C3' CVX CWX 104.8 60.0
C4' C3' CVX C6X 338.4 300.0
C4' C3' CVX H31B 218.5 180.0
C5' C4' C3' HC4' 181.3 180.0
C3' C4' C5' C6' 0.5 359.7
C3' C4' C5' BR5' 182.2 180.0
CWX CVX C3' C4' 104.8 60.0
C3' CVX CWX C6X 234.2 240.0
C3' CVX CWX H31B 114.9 120.0
C6X CVX CWX H31B 240.6 240.0
CWX CVX C6X C7X 131.6 65.0
CWX CVX C6X H42A 252.7 185.0
CWX CVX C6X H42B 7.6 305.0
OXX CWX CVX OYX 179.0 180.0
C6X CVX C3' C4' 338.4 300.0
C3' CVX C6X CWX 120.1 120.0
C3' CVX C6X H31B 239.3 239.9
CWX CVX C6X H31B 119.2 120.0
C6X CVX CWX OXX 231.8 240.0
C6X CVX CWX OYX 52.8 60.0
C7X C6X CVX H42A 239.0 240.0
C7X C6X CVX H42B 124.0 120.0
CVX C6X C7X O8X 337.9 0.0
CVX C6X C7X O9X 157.8 180.0
H42A C6X CVX H42B 245.0 240.0
H31B CVX C3' C4' 218.5 180.0
C3' CVX H31B CWX 248.6 240.0
C3' CVX H31B C6X 124.2 120.0
CWX CVX H31B C6X 235.6 240.0
H31B CVX CWX OXX 351.1 360.0
H31B CVX CWX OYX 172.2 180.0
H31B CVX C6X C7X 12.4 305.0
H31B CVX C6X H42A 133.4 65.0
H31B CVX C6X H42B 248.4 185.1
OXX CWX CVX C6X 231.8 240.0
OXX CWX CVX H31B 351.1 360.0
CVX CWX OXX OYX 181.0 180.0
OYX CWX CVX C6X 52.8 60.0
OYX CWX CVX H31B 172.2 180.0
CVX CWX OYX OXX 178.9 180.0
C7X C6X CVX H31B 12.4 305.0
CVX C6X C7X H42A 123.3 120.0
CVX C6X C7X H42B 235.7 240.0
H42A C6X C7X H42B 112.4 120.0
O8X C7X C6X O9X 180.1 180.0
H42A C6X CVX H31B 133.4 65.0
CVX C6X H42A C7X 231.0 240.0
CVX C6X H42A H42B 117.0 120.0
C7X C6X H42A H42B 245.9 240.0
H42A C6X C7X O8X 214.6 240.1
H42A C6X C7X O9X 34.5 60.0
H42B C6X CVX H31B 248.4 185.1
CVX C6X H42B C7X 130.2 120.0
CVX C6X H42B H42A 242.3 240.0
C7X C6X H42B H42A 112.1 120.0
H42B C6X C7X O8X 102.2 120.0
H42B C6X C7X O9X 282.1 300.0
O8X C7X C6X H42A 214.6 240.1
O8X C7X C6X H42B 102.2 120.0
C6X C7X O8X O9X 179.9 180.0
O9X C7X C6X H42A 34.5 60.0
O9X C7X C6X H42B 282.1 300.0
C6X C7X O9X O8X 180.1 180.0
C1' C6' C5' C4' 359.4 0.5
C3' C4' C5' HC4' 178.7 180.0
C6' C5' C4' BR5' 178.3 179.7
C4' C5' C6' O6' 179.5 180.0
C3' C4' HC4' C5' 181.3 180.0
HC4' C4' C5' C6' 181.7 179.7
HC4' C4' C5' BR5' 3.5 360.0
C1' C6' C5' O6' 180.0 180.5
C6' C5' C4' HC4' 181.7 179.7
C4' C5' C6' BR5' 181.7 180.3
BR5' C5' C4' HC4' 3.5 360.0
C4' C5' BR5' C6' 178.3 179.7
BR5' C5' C6' O6' 357.8 359.7
C1' C6' O6' C5' 180.0 179.5
O6' C6' C5' BR5' 357.8 359.7