PDB Chemical Component 2AU

Ideal Model

Chemical Description

Name 2'-AMINOURIDINE
Formula C9 H14 N3 O8 P
Formal charge 0
Molecular weight 323.197 g/mol
Component type RNA LINKING
Nonstandard Parent Id U

Chemical features

Atom count 35
Chiral atom count 4
Chiral atoms C4' C3' C2' C1'
Observed leaving atoms OP3 HO3' OP2 H2P1
Bond count 36
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 2'-amino-2'-deoxyuridine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-4-amino-5-(2,4-dioxopyrimidin-1-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) N[C@@H]1[C@H](O)[C@@H](CO[P](O)(O)=O)O[C@H]1N2C=CC(=O)NC2=O
SMILES (CACTVS) N[CH]1[CH](O)[CH](CO[P](O)(O)=O)O[CH]1N2C=CC(=O)NC2=O
Stereo SMILES (OpenEye) C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)N
InChI descriptor InChI=1S/C9H14N3O8P/c10-6-7(14)4(3-19-21(16,17)18)20-8(6)12-2-1-5(13)11-9(12)15/h1-2,4,6-8,14H,3,10H2,(H,11,13,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChIKey descriptor OWNKJJAVEHMKCW-XVFCMESISA-N

Status Information

Last modified 2011-06-04
Created 2005-04-26
Release status REL
Model PDB code 2BQ2
Processing site EBI