PDB Chemical Component 1CC

Ideal Model

Chemical Description

Name 5-carboxy-2'-deoxycytidine monophosphate
Formula C10 H14 N3 O9 P
Formal charge 0
Molecular weight 351.207 g/mol
Component type DNA LINKING
Nonstandard Parent Id DC

Chemical features

Atom count 37
Chiral atom count 3
Chiral atoms C4' C3' C1'
Observed leaving atoms OP3
Bond count 38
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 5-carboxy-2'-deoxycytidine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) 4-azanyl-2-oxidanylidene-1-[(2R,4S,5R)-4-oxidanyl-5-(phosphonooxymethyl)oxolan-2-yl]pyrimidine-5-carboxylic acid

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=NC(=O)N(C=C1C(O)=O)[C@H]2C[C@H](O)[C@@H](CO[P](O)(O)=O)O2
SMILES (CACTVS) NC1=NC(=O)N(C=C1C(O)=O)[CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2
Stereo SMILES (OpenEye) C1[C@@H]([C@H](O[C@H]1N2C=C(C(=NC2=O)N)C(=O)O)COP(=O)(O)O)O
InChI descriptor InChI=1S/C10H14N3O9P/c11-8-4(9(15)16)2-13(10(17)12-8)7-1-5(14)6(22-7)3-21-23(18,19)20/h2,5-7,14H,1,3H2,(H,15,16)(H2,11,12,17)(H2,18,19,20)/t5-,6+,7+/m0/s1
InChIKey descriptor WEUNVGZSKGOUOC-RRKCRQDMSA-N

Status Information

Last modified 2012-02-10
Created 2011-11-17
Release status REL
Model PDB code 3UO7
Processing site RCSB