PDB Chemical Component 112

Ideal Model

Chemical Description

Name THIOPHOSPHORIC ACID O-((ADENOSYL-PHOSPHO)PHOSPHO)-S-ACETAMIDYL-DIESTER
Formula C12 H19 N6 O13 P3 S
Formal charge 0
Molecular weight 580.298 g/mol
Component type NON-POLYMER

Chemical features

Atom count 54
Chiral atom count 7
Chiral atoms PG PB PA C4' C3' C2' C1'
Bond count 56
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 5'-O-[(S)-{[(S)-{[(R)-[(2-amino-2-oxoethyl)sulfanyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]adenosine
Systematic name (OpenEye OEToolkits) (2-amino-2-oxo-ethyl)sulfanyl-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxy-phosphinic acid

Chemical Descriptors

Stereo SMILES (CACTVS) NC(=O)CS[P@@](O)(=O)O[P@](O)(=O)O[P@](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23
SMILES (CACTVS) NC(=O)CS[P](O)(=O)O[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23
Stereo SMILES (OpenEye) c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@](=O)(O)O[P@@](=O)(O)SCC(=O)N)O)O)N
InChI descriptor InChI=1S/C12H19N6O13P3S/c13-6(19)2-35-34(26,27)31-33(24,25)30-32(22,23)28-1-5-8(20)9(21)12(29-5)18-4-17-7-10(14)15-3-16-11(7)18/h3-5,8-9,12,20-21H,1-2H2,(H2,13,19)(H,22,23)(H,24,25)(H,26,27)(H2,14,15,16)/t5-,8-,9-,12-/m1/s1
InChIKey descriptor ZAOVTTQZIXCKOL-JJNLEZRASA-N

Status Information

Last modified 2011-06-04
Created 2000-12-04
Release status REL
Model PDB code 1GAG
Processing site PDBJ