PDB Chemical Component 112

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 112

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
NS C2S 1.333 1.347
NS HNS1 1.020 0.970
NS HNS2 1.020 0.970
C2S O2S 1.235 1.213
C2S C1S 1.528 1.507
C1S S1G 1.821 1.814
C1S H1S1 1.115 1.089
C1S H1S2 1.115 1.088
PG S1G 2.021 2.120
PG O2G 1.472 1.610
PG O3G 1.478 1.479
PG O3B 1.532 1.610
O2G HOG2 0.950 0.967
PB O1B 1.480 1.479
PB O2B 1.468 1.611
PB O3B 1.534 1.608
PB O3A 1.524 1.609
O2B HOB2 0.950 0.965
PA O1A 1.489 1.479
PA O2A 1.491 1.610
PA O3A 1.523 1.610
PA O5' 1.636 1.608
O2A HOA2 0.950 0.966
O5' C5' 1.455 1.428
C5' C4' 1.512 1.530
C5' H5'1 1.115 1.090
C5' H5'2 1.116 1.090
C4' O4' 1.454 1.438
C4' C3' 1.522 1.541
C4' H4' 1.116 1.090
O4' C1' 1.422 1.444
C3' O3' 1.426 1.428
C3' C2' 1.521 1.551
C3' H3' 1.114 1.090
O3' HO3' 0.949 0.967
C2' O2' 1.415 1.429
C2' C1' 1.534 1.549
C2' H2' 1.114 1.090
O2' HO2' 0.951 0.967
C1' N9 1.473 1.464
C1' H1' 1.116 1.090
N9 C8 1.376 1.362
N9 C4 1.379 1.372
C8 N7 1.314 1.301
C8 H8 1.102 1.080
N7 C5 1.385 1.354
C5 C6 1.411 1.405
C5 C4 1.385 1.404
C6 N6 1.336 1.384
C6 N1 1.348 1.329
N6 HN61 1.020 0.970
N6 HN62 1.020 0.970
N1 C2 1.339 1.320
C2 N3 1.333 1.316
C2 H2 1.104 1.079
N3 C4 1.343 1.329

Bond Angles for 112

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2S NS HNS1 123.8 120.0
C2S NS HNS2 116.1 120.0
NS C2S O2S 116.1 120.0
NS C2S C1S 123.8 120.1
HNS1 NS HNS2 120.1 120.0
O2S C2S C1S 120.0 120.0
C2S C1S S1G 116.0 109.5
C2S C1S H1S1 109.9 109.4
C2S C1S H1S2 109.9 109.4
S1G C1S H1S1 109.8 109.5
S1G C1S H1S2 109.8 109.5
C1S S1G PG 103.9 100.0
H1S1 C1S H1S2 100.4 109.5
S1G PG O2G 110.4 109.5
S1G PG O3G 112.0 109.4
S1G PG O3B 111.1 109.5
O2G PG O3G 114.5 109.5
O2G PG O3B 104.5 109.5
PG O2G HOG2 110.3 106.8
O3G PG O3B 103.9 109.5
PG O3B PB 137.0 106.8
O1B PB O2B 118.7 109.4
O1B PB O3B 113.7 109.6
O1B PB O3A 110.2 109.4
O2B PB O3B 109.3 109.5
O2B PB O3A 107.9 109.4
PB O2B HOB2 118.6 106.8
O3B PB O3A 94.3 109.5
PB O3A PA 131.5 106.9
O1A PA O2A 120.6 109.5
O1A PA O3A 106.4 109.4
O1A PA O5' 109.4 109.5
O2A PA O3A 109.5 109.4
O2A PA O5' 106.4 109.5
PA O2A HOA2 120.5 106.8
O3A PA O5' 103.2 109.5
PA O5' C5' 124.4 106.8
O5' C5' C4' 117.0 109.5
O5' C5' H5'1 109.5 109.5
O5' C5' H5'2 109.5 109.5
C4' C5' H5'1 109.5 109.5
C4' C5' H5'2 109.4 109.4
C5' C4' O4' 109.0 109.9
C5' C4' C3' 116.0 109.9
C5' C4' H4' 103.7 109.9
H5'1 C5' H5'2 100.7 109.5
O4' C4' C3' 104.0 107.4
O4' C4' H4' 115.8 109.8
C4' O4' C1' 109.8 107.0
C3' C4' H4' 108.8 109.8
C4' C3' O3' 112.1 110.8
C4' C3' C2' 101.9 104.0
C4' C3' H3' 113.2 110.4
O4' C1' C2' 106.9 103.5
O4' C1' N9 109.2 110.6
O4' C1' H1' 113.2 110.6
O3' C3' C2' 110.9 110.5
O3' C3' H3' 104.6 110.4
C3' O3' HO3' 112.1 106.9
C2' C3' H3' 114.3 110.5
C3' C2' O2' 111.6 110.9
C3' C2' C1' 101.6 102.2
C3' C2' H2' 113.3 111.0
O2' C2' C1' 109.6 110.9
O2' C2' H2' 105.7 110.8
C2' O2' HO2' 111.6 106.8
C1' C2' H2' 115.1 110.9
C2' C1' N9 114.4 110.8
C2' C1' H1' 107.8 110.6
N9 C1' H1' 105.5 110.6
C1' N9 C8 128.0 126.2
C1' N9 C4 126.5 126.3
C8 N9 C4 105.5 107.5
N9 C8 N7 113.8 109.9
N9 C8 H8 125.1 125.1
N9 C4 C5 106.0 106.0
N9 C4 N3 127.5 134.9
N7 C8 H8 121.1 125.0
C8 N7 C5 104.1 109.5
N7 C5 C6 132.3 134.7
N7 C5 C4 110.6 107.2
C6 C5 C4 117.1 118.2
C5 C6 N6 123.9 120.8
C5 C6 N1 117.8 118.5
C5 C4 N3 126.5 119.1
N6 C6 N1 118.3 120.7
C6 N6 HN61 123.8 120.0
C6 N6 HN62 107.1 120.0
C6 N1 C2 118.3 121.2
HN61 N6 HN62 107.2 119.9
N1 C2 N3 129.5 122.4
N1 C2 H2 115.6 118.7
N3 C2 H2 114.9 118.8
C2 N3 C4 110.7 120.7

Torsion Angles for 112

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
HNS1 NS C2S HNS2 180.1 180.2
O2S C2S NS C1S 180.2 179.9
NS C2S C1S S1G 271.0 179.9
NS C2S C1S H1S1 36.3 299.9
NS C2S C1S H1S2 145.8 59.9
C2S NS HNS1 HNS2 179.9 179.8
HNS1 NS C2S O2S 0.2 359.9
HNS1 NS C2S C1S 179.9 180.0
C2S NS HNS2 HNS1 180.1 180.2
HNS2 NS C2S O2S 180.0 179.7
HNS2 NS C2S C1S 359.8 359.9
O2S C2S NS HNS1 0.2 359.9
O2S C2S NS HNS2 180.0 179.7
NS C2S O2S C1S 179.8 180.1
O2S C2S C1S S1G 90.8 0.1
O2S C2S C1S H1S1 216.0 120.1
O2S C2S C1S H1S2 325.6 240.1
C1S C2S NS HNS1 179.9 180.0
C1S C2S NS HNS2 359.8 359.9
NS C2S C1S O2S 180.2 179.9
S1G C1S C2S H1S1 234.7 240.0
S1G C1S C2S H1S2 125.2 120.0
C2S C1S S1G PG 268.0 180.0
H1S1 C1S C2S H1S2 250.5 240.0
C2S C1S S1G H1S1 125.3 119.9
C2S C1S S1G H1S2 234.8 240.0
H1S1 C1S S1G H1S2 109.5 120.1
C1S S1G PG O2G 60.1 300.0
C1S S1G PG O3G 188.9 60.0
C1S S1G PG O3B 304.6 180.0
C2S C1S H1S1 S1G 231.3 240.0
C2S C1S H1S1 H1S2 115.7 119.9
S1G C1S H1S1 H1S2 244.4 239.9
H1S1 C1S S1G PG 142.7 60.1
C2S C1S H1S2 S1G 128.7 120.0
C2S C1S H1S2 H1S1 244.3 240.1
S1G C1S H1S2 H1S1 115.6 120.1
H1S2 C1S S1G PG 33.3 300.0
PG S1G C1S H1S1 142.7 60.1
PG S1G C1S H1S2 33.3 300.0
O2G PG S1G O3G 231.2 240.0
O2G PG S1G O3B 115.5 120.0
S1G PG O2G HOG2 180.0 300.1
O3G PG S1G O3B 244.3 240.0
S1G PG O3B PB 82.0 180.0
S1G PG O2G O3G 127.5 120.0
S1G PG O2G O3B 240.4 240.0
O3G PG O2G O3B 113.0 120.0
O2G PG O3B PB 322.9 60.0
S1G PG O3G O2G 233.4 240.0
S1G PG O3G O3B 120.0 120.0
O2G PG O3G O3B 246.6 240.0
O3G PG O2G HOG2 52.5 180.1
O3G PG O3B PB 202.6 299.9
S1G PG O3B O2G 119.1 120.0
S1G PG O3B O3G 239.4 240.0
O2G PG O3B O3G 120.3 120.0
O3B PG O2G HOG2 299.6 60.1
O1B PB O3B PG 237.6 300.1
O2B PB O3B PG 12.7 60.0
PG O3B PB O3A 123.4 180.0
HOG2 O2G PG O3G 52.5 180.1
HOG2 O2G PG O3B 299.6 60.1
PG O3B PB O1B 237.6 300.1
O2B PB O1B O3B 229.5 240.0
O2B PB O1B O3A 125.1 119.9
O1B PB O2B HOB2 180.0 180.1
O3B PB O1B O3A 255.6 239.9
O1B PB O3A PA 67.7 59.9
PG O3B PB O2B 12.7 60.0
O1B PB O2B O3B 132.5 120.1
O1B PB O2B O3A 233.8 240.1
O3B PB O2B O3A 101.4 120.1
O2B PB O3A PA 296.7 300.0
O1B PB O3B O2B 225.0 240.0
O1B PB O3B O3A 114.3 120.0
O2B PB O3B O3A 249.3 240.0
O3B PB O2B HOB2 47.5 60.0
O3B PB O3A PA 184.8 180.0
O1B PB O3A O2B 131.0 119.9
O1B PB O3A O3B 242.8 239.9
O2B PB O3A O3B 111.8 120.0
O3A PB O2B HOB2 306.2 299.9
O1A PA O3A PB 285.4 300.0
O2A PA O3A PB 57.2 60.0
PB O3A PA O5' 170.2 180.0
HOB2 O2B PB O3B 47.5 60.0
HOB2 O2B PB O3A 306.2 299.9
PB O3A PA O1A 285.4 300.0
O2A PA O1A O3A 234.7 240.0
O2A PA O1A O5' 123.9 120.0
O1A PA O2A HOA2 180.0 180.0
O3A PA O1A O5' 249.2 239.9
O1A PA O5' C5' 268.4 60.0
PB O3A PA O2A 57.2 60.0
O1A PA O2A O3A 123.8 120.0
O1A PA O2A O5' 234.7 240.0
O3A PA O2A O5' 110.9 120.0
O2A PA O5' C5' 136.6 300.0
O1A PA O3A O2A 228.2 240.0
O1A PA O3A O5' 115.2 120.0
O2A PA O3A O5' 247.0 240.0
O3A PA O2A HOA2 56.2 60.0
O3A PA O5' C5' 21.3 180.0
O1A PA O5' O2A 131.8 120.0
O1A PA O5' O3A 247.1 240.0
O2A PA O5' O3A 115.2 120.0
O5' PA O2A HOA2 305.3 300.0
PA O5' C5' C4' 209.8 180.0
PA O5' C5' H5'1 335.1 300.0
PA O5' C5' H5'2 84.6 60.0
HOA2 O2A PA O3A 56.2 60.0
HOA2 O2A PA O5' 305.3 300.0
C4' C5' O5' H5'1 234.7 240.0
C4' C5' O5' H5'2 125.2 120.0
O5' C5' C4' O4' 306.4 61.7
O5' C5' C4' C3' 63.3 179.7
O5' C5' C4' H4' 182.5 300.7
H5'1 C5' O5' H5'2 250.5 240.0
O5' C5' C4' H5'1 125.3 120.0
O5' C5' C4' H5'2 234.7 240.0
H5'1 C5' C4' H5'2 109.4 120.0
O4' C4' C5' C3' 243.1 242.0
O4' C4' C5' H4' 123.9 121.0
C5' C4' O4' C1' 146.0 146.0
C3' C4' C5' H4' 240.8 239.0
C5' C4' C3' O3' 84.6 119.8
C5' C4' C3' C2' 203.2 238.6
C5' C4' C3' H3' 326.5 357.2
O5' C5' H5'1 C4' 230.5 240.0
O5' C5' H5'1 H5'2 115.3 120.0
C4' C5' H5'1 H5'2 244.8 240.0
H5'1 C5' C4' O4' 181.1 301.7
H5'1 C5' C4' C3' 298.0 59.7
H5'1 C5' C4' H4' 57.2 180.7
O5' C5' H5'2 C4' 129.5 120.0
O5' C5' H5'2 H5'1 244.7 240.0
C4' C5' H5'2 H5'1 115.2 120.0
H5'2 C5' C4' O4' 71.6 181.7
H5'2 C5' C4' C3' 188.5 299.7
H5'2 C5' C4' H4' 307.8 60.7
O4' C4' C5' H5'1 181.1 301.7
O4' C4' C5' H5'2 71.6 181.7
C5' C4' O4' C3' 124.3 119.6
C5' C4' O4' H4' 243.6 239.0
C3' C4' O4' H4' 119.2 119.4
O4' C4' C3' O3' 204.2 239.4
O4' C4' C3' C2' 322.9 358.1
O4' C4' C3' H3' 86.1 116.7
C4' O4' C1' C2' 2.8 320.0
C4' O4' C1' N9 238.5 201.3
C4' O4' C1' H1' 121.3 78.4
C3' C4' C5' H5'1 298.0 59.7
C3' C4' C5' H5'2 188.5 299.7
C5' C4' C3' O4' 240.3 240.5
C5' C4' C3' H4' 116.4 121.1
O4' C4' C3' H4' 236.1 240.6
C3' C4' O4' C1' 21.6 26.4
O3' C3' C4' C2' 241.3 241.3
O3' C3' C4' H3' 118.1 122.7
C4' C3' O3' HO3' 179.9 176.2
C2' C3' C4' H3' 236.7 241.4
C4' C3' C2' O2' 281.1 220.8
C4' C3' C2' C1' 37.8 339.0
C4' C3' C2' H2' 161.9 97.2
H4' C4' C5' H5'1 57.2 180.7
H4' C4' C5' H5'2 307.8 60.7
C5' C4' H4' O4' 119.3 121.0
C5' C4' H4' C3' 235.9 238.9
O4' C4' H4' C3' 116.6 117.9
H4' C4' O4' C1' 262.4 267.0
H4' C4' C3' O3' 328.1 358.8
H4' C4' C3' C2' 86.8 117.5
H4' C4' C3' H3' 210.1 236.1
C1' O4' C4' C3' 21.6 26.4
C1' O4' C4' H4' 262.4 267.0
C3' C2' C1' O4' 334.1 37.1
O2' C2' C1' O4' 92.3 155.3
O4' C1' C2' H2' 211.3 278.8
C2' C1' O4' N9 124.3 118.7
C2' C1' O4' H1' 241.5 241.6
N9 C1' O4' H1' 117.2 122.8
O4' C1' N9 C8 36.9 28.6
O4' C1' N9 C4 216.4 208.2
O3' C3' C4' H4' 328.1 358.8
C4' C3' O3' C2' 113.2 114.7
C4' C3' O3' H3' 236.9 237.3
C2' C3' O3' H3' 123.7 122.6
O3' C3' C2' O2' 40.5 339.7
O3' C3' C2' C1' 157.3 98.0
O3' C3' C2' H2' 281.4 216.2
C2' C3' C4' H4' 86.8 117.5
C4' C3' C2' O3' 240.5 241.1
C4' C3' C2' H3' 122.5 118.5
O4' C1' C2' C3' 334.1 37.1
O3' C3' C2' H3' 242.0 237.5
C2' C3' O3' HO3' 66.7 61.5
O2' C2' C3' C1' 243.2 241.8
O2' C2' C3' H2' 119.2 123.6
C3' C2' O2' HO2' 180.0 292.7
C1' C2' C3' H2' 235.9 241.8
C3' C2' C1' N9 95.1 155.7
C3' C2' C1' H1' 212.1 278.6
H3' C3' C4' H4' 210.1 236.1
C4' C3' H3' O3' 122.3 122.9
C4' C3' H3' C2' 243.9 245.4
O3' C3' H3' C2' 121.5 122.6
H3' C3' O3' HO3' 303.0 298.9
H3' C3' C2' O2' 158.5 102.3
H3' C3' C2' C1' 275.3 220.5
H3' C3' C2' H2' 39.3 338.7
HO3' O3' C3' C2' 66.7 61.5
HO3' O3' C3' H3' 303.0 298.9
O4' C1' C2' O2' 92.3 155.3
O2' C2' C3' H3' 158.5 102.3
C3' C2' O2' C1' 111.8 112.8
C3' C2' O2' H2' 236.4 236.3
C1' C2' O2' H2' 124.6 123.6
O2' C2' C1' N9 213.3 273.9
O2' C2' C1' H1' 330.3 36.8
O4' C1' C2' N9 239.0 241.4
O4' C1' C2' H1' 122.0 118.4
C1' C2' C3' H3' 275.3 220.5
C3' C2' C1' O2' 241.8 241.8
C3' C2' C1' H2' 122.9 118.3
O2' C2' C1' H2' 241.0 236.5
C1' C2' O2' HO2' 68.2 179.9
N9 C1' C2' H1' 243.0 237.0
C2' C1' N9 C8 277.1 274.4
C2' C1' N9 C4 96.6 94.0
H2' C2' C3' H3' 39.3 338.7
C3' C2' H2' O2' 122.5 123.6
C3' C2' H2' C1' 243.6 247.2
O2' C2' H2' C1' 121.1 123.6
H2' C2' O2' HO2' 303.6 56.3
H2' C2' C1' N9 332.3 37.4
H2' C2' C1' H1' 89.3 160.3
HO2' O2' C2' C1' 68.2 179.9
HO2' O2' C2' H2' 303.6 56.3
O4' C1' N9 C2' 119.7 114.2
O4' C1' N9 H1' 238.1 237.1
N9 C1' C2' H2' 332.3 37.4
C2' C1' N9 H1' 118.3 123.0
C8 N9 C1' C4 180.5 180.4
C1' N9 C8 N7 179.4 180.0
C1' N9 C8 H8 359.4 0.0
C1' N9 C4 C5 180.6 179.9
C1' N9 C4 N3 0.6 0.9
O4' C1' H1' C2' 242.0 246.0
O4' C1' H1' N9 119.3 122.9
H1' C1' C2' H2' 89.3 160.3
C2' C1' H1' N9 237.3 236.9
H1' C1' N9 C8 158.8 151.4
H1' C1' N9 C4 338.3 331.1
C8 N9 C1' H1' 158.8 151.4
C1' N9 C8 C4 179.6 179.7
C8 N9 C4 C5 0.2 359.6
C8 N9 C4 N3 180.2 180.6
N7 C8 N9 H8 180.0 179.9
N9 C8 N7 C5 0.0 0.0
C4 N9 C1' H1' 338.3 331.1
C1' N9 C4 C8 180.4 180.3
C4 N9 C8 N7 359.8 0.3
C4 N9 C8 H8 179.8 180.3
N7 C5 C4 N9 359.8 0.4
C6 C5 C4 N9 179.8 180.2
C5 C4 N9 N3 180.0 179.0
C2 N3 C4 N9 180.1 179.5
N7 C8 N9 C4 359.8 0.3
N9 C8 N7 H8 180.0 180.1
C8 N7 C5 C6 180.2 180.0
C8 N7 C5 C4 0.1 359.7
H8 C8 N9 C4 179.8 180.3
N9 C8 H8 N7 180.0 179.9
H8 C8 N7 C5 180.1 179.9
N9 C4 C5 N7 359.8 0.4
C5 N7 C8 H8 180.1 179.9
C6 C5 N7 C4 180.0 180.3
N7 C5 C6 N6 0.3 0.0
N7 C5 C6 N1 180.2 180.0
N7 C5 C4 N3 179.8 179.6
N9 C4 C5 C6 179.8 180.2
N7 C5 C6 C4 179.9 179.7
C6 C5 C4 N3 359.8 359.4
N6 C6 C5 N1 180.1 180.0
C5 C6 N6 HN61 180.0 180.0
C5 C6 N6 HN62 54.7 0.0
C5 C6 N1 C2 359.9 0.0
N9 C4 C5 N3 180.0 180.8
N7 C5 C4 C6 180.0 180.2
C4 C5 C6 N6 180.4 180.3
C4 C5 C6 N1 0.2 0.3
C2 N3 C4 C5 0.1 0.6
N6 C6 C5 C4 180.4 180.3
C5 C6 N6 N1 179.9 180.0
N6 C6 N1 C2 179.7 180.0
HN61 N6 C6 HN62 125.3 180.0
N1 C6 C5 C4 0.2 0.3
C5 C6 N1 N6 180.1 180.0
N1 C6 N6 HN61 0.2 0.0
N1 C6 N6 HN62 234.9 180.0
C6 N1 C2 N3 0.0 360.0
C6 N1 C2 H2 180.0 180.0
HN61 N6 C6 N1 0.2 0.0
C6 N6 HN61 HN62 234.7 180.0
HN62 N6 C6 N1 234.9 180.0
C6 N6 HN62 HN61 134.8 180.0
N3 C2 N1 H2 180.0 180.0
N1 C2 N3 C4 0.0 359.7
N9 C4 N3 C2 180.1 179.5
C5 C4 N3 C2 0.1 0.6
N1 C2 N3 H2 180.0 180.0
N1 C2 H2 N3 180.0 180.0
H2 C2 N3 C4 180.0 179.7
N9 C4 N3 C5 180.0 178.9
C4 N3 C2 H2 180.0 179.7