PDB Chemical Component 0G8

Ideal Model

Chemical Description

Name [(2R,5S)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-1,3-oxathiolan-2-yl]methyl trihydrogen diphosphate
Formula C8 H13 N3 O9 P2 S
Formal charge 0
Molecular weight 389.216 g/mol
Component type NON-POLYMER

Chemical features

Atom count 36
Chiral atom count 2
Chiral atoms C1' C4'
Bond count 37
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) [(2R,5S)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-1,3-oxathiolan-2-yl]methyl trihydrogen diphosphate
Systematic name (OpenEye OEToolkits) [(2R,5S)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-1,3-oxathiolan-2-yl]methyl phosphono hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=NC(=O)N(C=C1)[C@@H]2CS[C@H](CO[P](O)(=O)O[P](O)(O)=O)O2
SMILES (CACTVS) NC1=NC(=O)N(C=C1)[CH]2CS[CH](CO[P](O)(=O)O[P](O)(O)=O)O2
Stereo SMILES (OpenEye) C1[C@H](O[C@H](S1)COP(=O)(O)OP(=O)(O)O)N2C=CC(=NC2=O)N
InChI descriptor InChI=1S/C8H13N3O9P2S/c9-5-1-2-11(8(12)10-5)6-4-23-7(19-6)3-18-22(16,17)20-21(13,14)15/h1-2,6-7H,3-4H2,(H,16,17)(H2,9,10,12)(H2,13,14,15)/t6-,7+/m0/s1
InChIKey descriptor AAHOBGDTTMOZKD-NKWVEPMBSA-N

Status Information

Last modified 2014-08-22
Created 2012-01-06
Release status REL
Model PDB code 3VCW
Processing site RCSB