PDB Chemical Component XMP

Ideal Model

Chemical Description

Name XANTHOSINE-5'-MONOPHOSPHATE
Synonyms 5-MONOPHOSPHATE-9-BETA-D-RIBOFURANOSYL XANTHINE
Formula C10 H14 N4 O9 P
Formal charge 1
Molecular weight 365.213 g/mol
Component type NON-POLYMER

Chemical features

Atom count 38
Chiral atom count 4
Chiral atoms C4' C1' C2' C3'
Bond count 40
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 5'-xanthylic acid
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-(2,6-dioxo-3H-purin-7-ium-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)n2c[nH+]c3C(=O)NC(=O)Nc23
SMILES (CACTVS) O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)n2c[nH+]c3C(=O)NC(=O)Nc23
Stereo SMILES (OpenEye) c1[nH+]c2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)NC(=O)NC2=O
InChI descriptor InChI=1S/C10H13N4O9P/c15-5-3(1-22-24(19,20)21)23-9(6(5)16)14-2-11-4-7(14)12-10(18)13-8(4)17/h2-3,5-6,9,15-16H,1H2,(H2,19,20,21)(H2,12,13,17,18)/p+1/t3-,5-,6-,9-/m1/s1
InChIKey descriptor DCTLYFZHFGENCW-UUOKFMHZSA-O

Status Information

Last modified 2021-03-01
Created 1999-07-12
Release status REL
Model PDB code 1QK5
Processing site RCSB