PDB Chemical Component RUB

Ideal Model

Chemical Description

Name RIBULOSE-1,5-DIPHOSPHATE
Formula C5 H12 O11 P2
Formal charge 0
Molecular weight 310.090 g/mol
Component type SACCHARIDE

Chemical features

Atom count 30
Chiral atom count 2
Chiral atoms C3 C4
Bond count 29
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 1,5-di-O-phosphono-D-ribulose
Systematic name (OpenEye OEToolkits) [(3R,4R)-3,4-dihydroxy-2-oxo-5-phosphonooxy-pentyl] dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H](CO[P](O)(O)=O)[C@@H](O)C(=O)CO[P](O)(O)=O
SMILES (CACTVS) O[CH](CO[P](O)(O)=O)[CH](O)C(=O)CO[P](O)(O)=O
Stereo SMILES (OpenEye) C([C@H]([C@H](C(=O)COP(=O)(O)O)O)O)OP(=O)(O)O
InChI descriptor InChI=1S/C5H12O11P2/c6-3(1-15-17(9,10)11)5(8)4(7)2-16-18(12,13)14/h3,5-6,8H,1-2H2,(H2,9,10,11)(H2,12,13,14)/t3-,5-/m1/s1
InChIKey descriptor YAHZABJORDUQGO-NQXXGFSBSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1RXO
Processing site EBI