PDB Chemical Component RMB

Ideal Model

Chemical Description

Name N1-(5'-PHOSPHO-ALPHA-RIBOSYL)-5-METHYLBENZIMIDAZOLE
Synonyms MONO-[3,4-DIHYDROXY-5-(5-METHYL-BENZOIMIDAZOL-1-YL)-TETRAHYDOR-FURAN-2-YLMETHYL] ESTER
Formula C13 H17 N2 O7 P
Formal charge 0
Molecular weight 344.257 g/mol
Component type NON-POLYMER

Chemical features

Atom count 40
Chiral atom count 4
Chiral atoms C4' C3' C2' C1'
Bond count 42
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 5-methyl-1-(5-O-phosphono-alpha-D-ribofuranosyl)-1H-benzimidazole
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5S)-3,4-dihydroxy-5-(5-methylbenzimidazol-1-yl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) Cc1ccc2n(cnc2c1)[C@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O
SMILES (CACTVS) Cc1ccc2n(cnc2c1)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
Stereo SMILES (OpenEye) Cc1ccc2c(c1)ncn2[C@@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O
InChI descriptor InChI=1S/C13H17N2O7P/c1-7-2-3-9-8(4-7)14-6-15(9)13-12(17)11(16)10(22-13)5-21-23(18,19)20/h2-4,6,10-13,16-17H,5H2,1H3,(H2,18,19,20)/t10-,11-,12-,13+/m1/s1
InChIKey descriptor HGUDFQQPANTQEU-LPWJVIDDSA-N

Status Information

Last modified 2020-06-17
Created 2001-07-09
Release status REL
Model PDB code 1JHO
Processing site RCSB