PDB Chemical Component G2M

Ideal Model

Chemical Description

Name 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(1-methyl-1-phosphonoethyl)phosphoryl]oxy}phosphoryl]guanosine
Formula C13 H22 N5 O12 P3
Formal charge 0
Molecular weight 533.261 g/mol
Component type NON-POLYMER

Chemical features

Atom count 55
Chiral atom count 3
Chiral atoms C1' C3' C4'
Bond count 57
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(2-phosphonopropan-2-yl)phosphoryl]oxy}phosphoryl]guanosine
Systematic name (OpenEye OEToolkits) 2-[[[(2R,3S,5R)-5-(2-azanyl-6-oxo-1H-purin-9-yl)-3-hydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]propan-2-ylphosphonic acid

Chemical Descriptors

Stereo SMILES (CACTVS) CC(C)([P](O)(O)=O)[P](O)(=O)O[P](O)(=O)OC[C@H]1O[C@H](C[C@@H]1O)n2cnc3C(=O)NC(=Nc23)N
SMILES (CACTVS) CC(C)([P](O)(O)=O)[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH](C[CH]1O)n2cnc3C(=O)NC(=Nc23)N
Stereo SMILES (OpenEye) CC(C)([P@](=O)(O)O[P@@](=O)(O)OC[C@@H]1[C@H](C[C@@H](O1)n2cnc3c2N=C(NC3=O)N)O)P(=O)(O)O
InChI descriptor InChI=1S/C13H22N5O12P3/c1-13(2,31(21,22)23)32(24,25)30-33(26,27)28-4-7-6(19)3-8(29-7)18-5-15-9-10(18)16-12(14)17-11(9)20/h5-8,19H,3-4H2,1-2H3,(H,24,25)(H,26,27)(H2,21,22,23)(H3,14,16,17,20)/t6-,7+,8+/m0/s1
InChIKey descriptor NTNZTLKYOXRXOS-XLPZGREQSA-N

Status Information

Last modified 2011-06-04
Created 2009-09-14
Release status REL
Model PDB code 3JPR
Processing site RCSB