PDB Chemical Component FHU

Ideal Model

Chemical Description

Name (5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE
Formula C9 H14 F N2 O10 P
Formal charge 0
Molecular weight 360.187 g/mol
Component type RNA LINKING
Nonstandard Parent Id U

Chemical features

Atom count 37
Chiral atom count 6
Chiral atoms C5 C6 C1' C2' C3' C4'
Observed leaving atoms OP3 HO3'
Bond count 38
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) (1R)-1,4-anhydro-1-[(4R,5S)-5-fluoro-4-hydroxy-2,6-dioxohexahydropyrimidin-5-yl]-5-O-phosphono-D-ribitol
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-[(4R,5S)-5-fluoro-4-hydroxy-2,6-dioxo-1,3-diazinan-5-yl]-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H]1NC(=O)NC(=O)[C@]1(F)[C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]2O
SMILES (CACTVS) O[CH]1NC(=O)NC(=O)[C]1(F)[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O
Stereo SMILES (OpenEye) C([C@@H]1[C@H]([C@H]([C@@H](O1)[C@@]2([C@H](NC(=O)NC2=O)O)F)O)O)OP(=O)(O)O
InChI descriptor InChI=1S/C9H14FN2O10P/c10-9(6(15)11-8(17)12-7(9)16)5-4(14)3(13)2(22-5)1-21-23(18,19)20/h2-6,13-15H,1H2,(H2,18,19,20)(H2,11,12,16,17)/t2-,3-,4-,5-,6-,9+/m1/s1
InChIKey descriptor MDODZQNHCLANBT-ZTZBTGHISA-N

Status Information

Last modified 2011-06-04
Created 2001-11-02
Release status REL
Model PDB code 1K8W
Processing site RCSB