PDB Chemical Component F86

Ideal Model

Chemical Description

Name [(2~{R},3~{S},4~{R},5~{R})-5-(4-azanylpyrrolo[2,1-f][1,2,4]triazin-7-yl)-5-cyano-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate
Synonyms Remdesivir, bound form
Formula C12 H14 N5 O7 P
Formal charge 0
Molecular weight 371.243 g/mol
Component type non-polymer

Chemical features

Atom count 39
Chiral atom count 4
Chiral atoms C2 C4 C1 C3
Observed leaving atoms O7 H14
Bond count 41
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) {(2R,3S,4R,5R)-5-[(8R)-4-aminopyrrolo[2,1-f][1,2,4]triazin-7-yl]-5-cyano-3,4-dihydroxyoxolan-2-yl}methyl dihydrogen phosphate (non-preferred name)
Systematic name (OpenEye OEToolkits) [(2~{R},3~{S},4~{R},5~{R})-5-(4-azanylpyrrolo[2,1-f][1,2,4]triazin-7-yl)-5-cyano-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnn2c1ccc2[C@@]3(O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O)C#N
SMILES (CACTVS) Nc1ncnn2c1ccc2[C]3(O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O)C#N
Stereo SMILES (OpenEye) c1cc(n2c1c(ncn2)N)[C@]3([C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)C#N
InChI descriptor InChI=1S/C12H14N5O7P/c13-4-12(8-2-1-6-11(14)15-5-16-17(6)8)10(19)9(18)7(24-12)3-23-25(20,21)22/h1-2,5,7,9-10,18-19H,3H2,(H2,14,15,16)(H2,20,21,22)/t7-,9-,10-,12+/m1/s1
InChIKey descriptor ZBHOHJWLOOFLMW-LTGWCKQJSA-N

Status Information

Last modified 2022-10-05
Created 2020-04-14
Release status REL
Model PDB code 7BV2
Processing site PDBJ