PDB Chemical Component CTP

Ideal Model

Chemical Description

Name CYTIDINE-5'-TRIPHOSPHATE
Formula C9 H16 N3 O14 P3
Formal charge 0
Molecular weight 483.156 g/mol
Component type NON-POLYMER

Chemical features

Atom count 45
Chiral atom count 6
Chiral atoms C1' C2' C3' C4' PA PB
Bond count 46
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) cytidine 5'-(tetrahydrogen triphosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-(4-amino-2-oxo-pyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl (hydroxy-phosphonooxy-phosphoryl) hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=NC(=O)N(C=C1)[C@@H]2O[C@H](CO[P@@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]2O
SMILES (CACTVS) NC1=NC(=O)N(C=C1)[CH]2O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]2O
Stereo SMILES (OpenEye) C1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O
InChI descriptor InChI=1S/C9H16N3O14P3/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(24-8)3-23-28(19,20)26-29(21,22)25-27(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,21,22)(H2,10,11,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChIKey descriptor PCDQPRRSZKQHHS-XVFCMESISA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1COZ
Processing site RCSB