PDB Chemical Component CTD

Ideal Model

Chemical Description

Name 3-DEAZACYTIDINE
Formula C10 H14 N2 O5
Formal charge 0
Molecular weight 242.229 g/mol
Component type NON-POLYMER

Chemical features

Atom count 31
Chiral atom count 4
Chiral atoms C1' C2' C3' C4'
Bond count 32
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 4-amino-1-beta-D-ribofuranosylpyridin-2(1H)-one
Systematic name (OpenEye OEToolkits) 4-amino-1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyridin-2-one

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=CC(=O)N(C=C1)[C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O
SMILES (CACTVS) NC1=CC(=O)N(C=C1)[CH]2O[CH](CO)[CH](O)[CH]2O
Stereo SMILES (OpenEye) C1=CN(C(=O)C=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O
InChI descriptor InChI=1S/C10H14N2O5/c11-5-1-2-12(7(14)3-5)10-9(16)8(15)6(4-13)17-10/h1-3,6,8-10,13,15-16H,4,11H2/t6-,8-,9-,10-/m1/s1
InChIKey descriptor OGADSZTVCUXSOK-PEBGCTIMSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1ALN
Processing site RCSB