PDB Chemical Component CM0

Ideal Model

Chemical Description

Name 5-(CARBOXYMETHOXY) URIDINE-5'-MONOPHOSPHATE
Formula C11 H15 N2 O12 P
Formal charge 0
Molecular weight 398.217 g/mol
Component type RNA LINKING

Chemical features

Atom count 41
Chiral atom count 4
Chiral atoms C3' C4' C2' C1'
Observed leaving atoms O3P
Bond count 42
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 5-(carboxymethoxy)uridine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) 2-[1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(phosphonooxymethyl)oxolan-2-yl]-2,4-dioxo-pyrimidin-5-yl]oxyethanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)N2C=C(OCC(O)=O)C(=O)NC2=O
SMILES (CACTVS) O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)N2C=C(OCC(O)=O)C(=O)NC2=O
Stereo SMILES (OpenEye) C1=C(C(=O)NC(=O)N1[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O)OCC(=O)O
InChI descriptor InChI=1S/C11H15N2O12P/c14-6(15)3-23-4-1-13(11(19)12-9(4)18)10-8(17)7(16)5(25-10)2-24-26(20,21)22/h1,5,7-8,10,16-17H,2-3H2,(H,14,15)(H,12,18,19)(H2,20,21,22)/t5-,7-,8-,10-/m1/s1
InChIKey descriptor FRVLMVWBMGVDIG-VPCXQMTMSA-N

Status Information

Last modified 2011-06-04
Created 2007-03-21
Release status REL
Processing site RCSB