PDB Chemical Component CL9

Ideal Model

Chemical Description

Name 2-chloro-2'-deoxyadenosine
Formula C10 H12 Cl N5 O3
Formal charge 0
Molecular weight 285.687 g/mol
Component type NON-POLYMER

Chemical features

Atom count 31
Chiral atom count 3
Chiral atoms C1' C3' C4'
Bond count 33
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 2-chloro-2'-deoxyadenosine
Systematic name (OpenEye OEToolkits) (2R,3S,5R)-5-(6-amino-2-chloro-purin-9-yl)-2-(hydroxymethyl)oxolan-3-ol

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1nc(Cl)nc2n(cnc12)[C@H]3C[C@H](O)[C@@H](CO)O3
SMILES (CACTVS) Nc1nc(Cl)nc2n(cnc12)[CH]3C[CH](O)[CH](CO)O3
Stereo SMILES (OpenEye) c1nc2c(nc(nc2n1[C@H]3C[C@@H]([C@H](O3)CO)O)Cl)N
InChI descriptor InChI=1S/C10H12ClN5O3/c11-10-14-8(12)7-9(15-10)16(3-13-7)6-1-4(18)5(2-17)19-6/h3-6,17-18H,1-2H2,(H2,12,14,15)/t4-,5+,6+/m0/s1
InChIKey descriptor PTOAARAWEBMLNO-KVQBGUIXSA-N

Status Information

Last modified 2011-06-04
Created 2008-02-18
Release status REL
Model PDB code 2ZI9
Processing site PDBJ