PDB Chemical Component C5X

Ideal Model

Chemical Description

Name 3-[(2R)-oxiran-2-yl]propyl beta-D-xylopyranoside
Synonyms 4,5-EPOXYPENTYL-BETA-D-XYLOSIDE; 3-[(2R)-oxiran-2-yl]propyl beta-D-xyloside; 3-[(2R)-oxiran-2-yl]propyl D-xyloside; 3-[(2R)-oxiran-2-yl]propyl xyloside
Formula C10 H18 O6
Formal charge 0
Molecular weight 234.246 g/mol
Component type D-saccharide
Nonstandard Parent Id XYP

Chemical features

Atom count 34
Chiral atom count 5
Chiral atoms C1 C2 C3 C4 C4'
Observed leaving atoms HO2 HO3 HO4
Bond count 35
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 3-[(2R)-oxiran-2-yl]propyl beta-D-xylopyranoside
Systematic name (OpenEye OEToolkits) (2R,3R,4S,5R)-2-[3-[(2R)-oxiran-2-yl]propoxy]oxane-3,4,5-triol

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@@H]1CO[C@@H](OCCC[C@@H]2CO2)[C@H](O)[C@H]1O
SMILES (CACTVS) O[CH]1CO[CH](OCCC[CH]2CO2)[CH](O)[CH]1O
Stereo SMILES (OpenEye) C1[C@H](O1)CCCO[C@H]2[C@@H]([C@H]([C@@H](CO2)O)O)O
InChI descriptor InChI=1S/C10H18O6/c11-7-5-16-10(9(13)8(7)12)14-3-1-2-6-4-15-6/h6-13H,1-5H2/t6-,7-,8+,9-,10-/m1/s1
InChIKey descriptor DMNHSULDBMDHLY-HOTMZDKISA-N

Status Information

Last modified 2020-07-17
Created 1999-07-08
Release status REL
Model PDB code 1RED
Processing site EBI