PDB Chemical Component B9B

Ideal Model

Chemical Description

Name 6-propyl, guanosine-5'-monophosphate
Formula C13 H20 N5 O8 P
Formal charge 0
Molecular weight 405.300 g/mol
Component type RNA linking
Nonstandard Parent Id G

Chemical features

Atom count 47
Chiral atom count 4
Chiral atoms C1' C2' C3' C4'
Bond count 49
Aromatic bond count 10

Chemical Identifiers

Systematic name (OpenEye OEToolkits) [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-propoxy-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) CCCOc1nc(N)nc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O
SMILES (CACTVS) CCCOc1nc(N)nc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
Stereo SMILES (OpenEye) CCCOc1c2c(nc(n1)N)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O
InChI descriptor InChI=1S/C13H20N5O8P/c1-2-3-24-11-7-10(16-13(14)17-11)18(5-15-7)12-9(20)8(19)6(26-12)4-25-27(21,22)23/h5-6,8-9,12,19-20H,2-4H2,1H3,(H2,14,16,17)(H2,21,22,23)/t6-,8-,9-,12-/m1/s1
InChIKey descriptor BEBGGMIXLKQJTH-WOUKDFQISA-N

Status Information

Last modified 2019-04-29
Created 2017-09-25
Release status REL
Model PDB code 6EK0
Processing site EBI