PDB Chemical Component B8W

Ideal Model

Chemical Description

Name 6-methyl, guanosine-5'-monophosphate
Formula C11 H16 N5 O8 P
Formal charge 0
Molecular weight 377.247 g/mol
Component type RNA linking
Nonstandard Parent Id G

Chemical features

Atom count 41
Chiral atom count 4
Chiral atoms C1' C2' C3' C4'
Bond count 43
Aromatic bond count 10

Chemical Identifiers

Systematic name (OpenEye OEToolkits) [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-methoxy-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) COc1nc(N)nc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O
SMILES (CACTVS) COc1nc(N)nc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
Stereo SMILES (OpenEye) COc1c2c(nc(n1)N)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O
InChI descriptor InChI=1S/C11H16N5O8P/c1-22-9-5-8(14-11(12)15-9)16(3-13-5)10-7(18)6(17)4(24-10)2-23-25(19,20)21/h3-4,6-7,10,17-18H,2H2,1H3,(H2,12,14,15)(H2,19,20,21)/t4-,6-,7-,10-/m1/s1
InChIKey descriptor LGIVPNCELBIIMS-KQYNXXCUSA-N

Status Information

Last modified 2019-04-30
Created 2017-09-25
Release status REL
Model PDB code 6EK0
Processing site EBI