PDB Chemical Component A8M

Ideal Model

Chemical Description

Name 5'-[(3-aminopropyl)(methyl)amino]-5'-deoxy-8-methyladenosine
Formula C15 H25 N7 O3
Formal charge 0
Molecular weight 351.404 g/mol
Component type NON-POLYMER

Chemical features

Atom count 50
Chiral atom count 4
Chiral atoms C4' C1' C2' C3'
Bond count 52
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 5'-[(3-aminopropyl)(methyl)amino]-5'-deoxy-8-methyladenosine
Systematic name (OpenEye OEToolkits) (2R,3R,4S,5R)-2-(6-amino-8-methyl-purin-9-yl)-5-[(3-aminopropyl-methyl-amino)methyl]oxolane-3,4-diol

Chemical Descriptors

Stereo SMILES (CACTVS) CN(CCCN)C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2c(C)nc3c(N)ncnc23
SMILES (CACTVS) CN(CCCN)C[CH]1O[CH]([CH](O)[CH]1O)n2c(C)nc3c(N)ncnc23
Stereo SMILES (OpenEye) Cc1nc2c(ncnc2n1[C@H]3[C@@H]([C@@H]([C@H](O3)C[N@@](C)CCCN)O)O)N
InChI descriptor InChI=1S/C15H25N7O3/c1-8-20-10-13(17)18-7-19-14(10)22(8)15-12(24)11(23)9(25-15)6-21(2)5-3-4-16/h7,9,11-12,15,23-24H,3-6,16H2,1-2H3,(H2,17,18,19)/t9-,11-,12-,15-/m1/s1
InChIKey descriptor PCQBSZQRAFEGGW-SDBHATRESA-N

Status Information

Last modified 2011-06-04
Created 2008-07-31
Release status REL
Model PDB code 3DZ2
Processing site RCSB