PDB Chemical Component 7DD

Ideal Model

Chemical Description

Name 7-deazaadenosine-5'-diphosphate
Formula C11 H16 N4 O10 P2
Formal charge 0
Molecular weight 426.213 g/mol
Component type NON-POLYMER

Chemical features

Atom count 43
Chiral atom count 4
Chiral atoms C4' C1' C2' C3'
Bond count 45
Aromatic bond count 10

Chemical Identifiers

Systematic name (OpenEye OEToolkits) [(2~{R},3~{S},4~{R},5~{R})-5-(4-azanylpyrrolo[2,3-d]pyrimidin-7-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnc2n(ccc12)[C@@H]3O[C@H](CO[P](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
SMILES (CACTVS) Nc1ncnc2n(ccc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
Stereo SMILES (OpenEye) c1cn(c2c1c(ncn2)N)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)O)O)O
InChI descriptor InChI=1S/C11H16N4O10P2/c12-9-5-1-2-15(10(5)14-4-13-9)11-8(17)7(16)6(24-11)3-23-27(21,22)25-26(18,19)20/h1-2,4,6-8,11,16-17H,3H2,(H,21,22)(H2,12,13,14)(H2,18,19,20)/t6-,7-,8-,11-/m1/s1
InChIKey descriptor NCKAOCPROMQFJK-KCGFPETGSA-N

Status Information

Last modified 2016-06-10
Created 2015-12-07
Release status REL
Model PDB code 5EX5
Processing site RCSB