PDB Chemical Component 7DA

Ideal Model

Chemical Description

Name 7-DEAZA-2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
Formula C11 H15 N4 O6 P
Formal charge 0
Molecular weight 330.234 g/mol
Component type DNA LINKING
Nonstandard Parent Id DA

Chemical features

Atom count 37
Chiral atom count 3
Chiral atoms C4' C1' C3'
Observed leaving atoms OP3 HO3'
Bond count 39
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 7-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-7H-pyrrolo[2,3-d]pyrimidin-4-amine
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-5-(4-aminopyrrolo[3,2-e]pyrimidin-7-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnc2n(ccc12)[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3
SMILES (CACTVS) Nc1ncnc2n(ccc12)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3
Stereo SMILES (OpenEye) c1cn(c2c1c(ncn2)N)[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O
InChI descriptor InChI=1S/C11H15N4O6P/c12-10-6-1-2-15(11(6)14-5-13-10)9-3-7(16)8(21-9)4-20-22(17,18)19/h1-2,5,7-9,16H,3-4H2,(H2,12,13,14)(H2,17,18,19)/t7-,8+,9+/m0/s1
InChIKey descriptor JNMXDKIIPORENX-DJLDLDEBSA-N

Status Information

Last modified 2011-06-04
Created 2004-08-08
Release status REL
Model PDB code 1U1K
Processing site RCSB