PDB Chemical Component 6OG

Ideal Model

Chemical Description

Name 6-O-METHYL GUANOSINE-5'-MONOPHOSPHATE
Formula C11 H16 N5 O7 P
Formal charge 0
Molecular weight 361.248 g/mol
Component type DNA LINKING
Nonstandard Parent Id DG

Chemical features

Atom count 40
Chiral atom count 3
Chiral atoms C4' C1' C3'
Observed leaving atoms OP3 HO3'
Bond count 42
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 9-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-6-methoxy-9H-purin-2-amine
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-5-(2-amino-6-methoxy-purin-9-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) COc1nc(N)nc2n(cnc12)[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3
SMILES (CACTVS) COc1nc(N)nc2n(cnc12)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3
Stereo SMILES (OpenEye) COc1c2c(nc(n1)N)n(cn2)[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O
InChI descriptor InChI=1/C11H16N5O7P/c1-21-10-8-9(14-11(12)15-10)16(4-13-8)7-2-5(17)6(23-7)3-22-24(18,19)20/h4-7,17H,2-3H2,1H3,(H2,12,14,15)(H2,18,19,20)/t5-,6+,7+/m0/s1/f/h18-19H,12H2
InChIKey descriptor GFRAHVJOXXMIDI-XSXBNAMCDE

Status Information

Last modified 2009-01-07
Created 2004-04-30
Release status REL
Replaces G32
Model PDB code 1T38
Processing site RCSB