PDB Chemical Component 1DM

Ideal Model

Chemical Description

Name N-(2-MORPHOLIN-4-YL-1-MORPHOLIN-4-YLMETHYL-ETHYL)-3-NITRO-5-(3,4,5-TRIHYDROXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-2-YLOXY)-BENZAMIDE
Formula C24 H36 N4 O11
Formal charge 0
Molecular weight 556.563 g/mol
Component type NON-POLYMER

Chemical features

Atom count 75
Chiral atom count 5
Chiral atoms C1 C5 C4 C3 C2
Bond count 78
Aromatic bond count 6

Chemical Identifiers

Systematic name (ACDLabs) 3-(alpha-D-galactopyranosyloxy)-N-[2-morpholin-4-yl-1-(morpholin-4-ylmethyl)ethyl]-5-nitrobenzamide
Systematic name (OpenEye OEToolkits) N-[1,3-di(morpholin-4-yl)propan-2-yl]-3-nitro-5-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-benzamide

Chemical Descriptors

Stereo SMILES (CACTVS) OC[C@H]1O[C@H](Oc2cc(cc(c2)[N+]([O-])=O)C(=O)NC(CN3CCOCC3)CN4CCOCC4)[C@H](O)[C@@H](O)[C@H]1O
SMILES (CACTVS) OC[CH]1O[CH](Oc2cc(cc(c2)[N+]([O-])=O)C(=O)NC(CN3CCOCC3)CN4CCOCC4)[CH](O)[CH](O)[CH]1O
Stereo SMILES (OpenEye) c1c(cc(cc1[N+](=O)[O-])O[C@@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)O)C(=O)NC(CN3CCOCC3)CN4CCOCC4
InChI descriptor InChI=1S/C24H36N4O11/c29-14-19-20(30)21(31)22(32)24(39-19)38-18-10-15(9-17(11-18)28(34)35)23(33)25-16(12-26-1-5-36-6-2-26)13-27-3-7-37-8-4-27/h9-11,16,19-22,24,29-32H,1-8,12-14H2,(H,25,33)/t19-,20+,21+,22-,24+/m1/s1
InChIKey descriptor MCMWCTMAKPQTPI-WGNYYXNJSA-N

Status Information

Last modified 2011-06-04
Created 2003-07-17
Release status REL
Model PDB code 1PZI
Processing site RCSB