PDB Chemical Component ZZ3
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ZZ3
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N5 |
C2 |
1.355 |
1.380 |
| C2 |
N4 |
1.350 |
1.329 |
| C2 |
N1 |
1.350 |
1.331 |
| N4 |
C4 |
1.350 |
1.329 |
| N1 |
C3 |
1.350 |
1.322 |
| C3 |
C8 |
1.505 |
1.507 |
| C3 |
N3 |
1.350 |
1.322 |
| N3 |
C4 |
1.350 |
1.331 |
| C4 |
S1 |
1.695 |
1.762 |
| S1 |
C6 |
1.763 |
1.809 |
| N5 |
H51N |
1.000 |
0.970 |
| N5 |
H52N |
1.001 |
0.971 |
| C6 |
H61C |
1.100 |
1.090 |
| C6 |
H62C |
1.100 |
1.090 |
| C6 |
H63C |
1.100 |
1.090 |
| C8 |
H81C |
1.100 |
1.090 |
| C8 |
H82C |
1.100 |
1.090 |
| C8 |
H83C |
1.100 |
1.090 |
Bond Angles for ZZ3
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N5 |
C2 |
N4 |
120.0 |
120.0 |
| N5 |
C2 |
N1 |
120.0 |
120.0 |
| C2 |
N5 |
H51N |
109.5 |
120.0 |
| C2 |
N5 |
H52N |
109.5 |
120.0 |
| N4 |
C2 |
N1 |
120.0 |
119.9 |
| C2 |
N4 |
C4 |
120.0 |
119.8 |
| C2 |
N1 |
C3 |
120.0 |
120.1 |
| N4 |
C4 |
N3 |
120.0 |
119.9 |
| N4 |
C4 |
S1 |
120.0 |
120.0 |
| N1 |
C3 |
C8 |
120.0 |
119.9 |
| N1 |
C3 |
N3 |
120.0 |
120.1 |
| C8 |
C3 |
N3 |
120.0 |
120.0 |
| C3 |
C8 |
H81C |
109.5 |
109.5 |
| C3 |
C8 |
H82C |
109.5 |
109.5 |
| C3 |
C8 |
H83C |
109.5 |
109.5 |
| C3 |
N3 |
C4 |
120.0 |
120.1 |
| N3 |
C4 |
S1 |
120.0 |
120.1 |
| C4 |
S1 |
C6 |
109.5 |
100.0 |
| S1 |
C6 |
H61C |
109.5 |
109.5 |
| S1 |
C6 |
H62C |
109.5 |
109.5 |
| S1 |
C6 |
H63C |
109.4 |
109.4 |
| H51N |
N5 |
H52N |
109.5 |
120.0 |
| H61C |
C6 |
H62C |
109.5 |
109.5 |
| H61C |
C6 |
H63C |
109.5 |
109.5 |
| H62C |
C6 |
H63C |
109.5 |
109.5 |
| H81C |
C8 |
H82C |
109.5 |
109.5 |
| H81C |
C8 |
H83C |
109.4 |
109.4 |
| H82C |
C8 |
H83C |
109.5 |
109.5 |
Torsion Angles for ZZ3
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N4 |
C2 |
N5 |
N1 |
180.1 |
180.3 |
| N5 |
C2 |
N4 |
C4 |
180.0 |
180.0 |
| N5 |
C2 |
N1 |
C3 |
180.0 |
180.0 |
| H51N |
N5 |
C2 |
H52N |
240.0 |
180.3 |
| N5 |
C2 |
N4 |
N1 |
179.9 |
179.7 |
| N4 |
C2 |
N5 |
H51N |
19.0 |
0.0 |
| N4 |
C2 |
N5 |
H52N |
139.0 |
179.7 |
| N4 |
C2 |
N1 |
C3 |
360.0 |
359.8 |
| C2 |
N4 |
C4 |
N3 |
360.0 |
0.0 |
| C2 |
N4 |
C4 |
S1 |
180.0 |
180.0 |
| N5 |
C2 |
N1 |
N4 |
180.1 |
180.3 |
| N1 |
C2 |
N5 |
H51N |
198.9 |
179.7 |
| N1 |
C2 |
N5 |
H52N |
318.9 |
359.4 |
| N1 |
C2 |
N4 |
C4 |
0.0 |
0.2 |
| C2 |
N1 |
C3 |
C8 |
180.0 |
180.0 |
| C2 |
N1 |
C3 |
N3 |
0.0 |
360.0 |
| C4 |
N4 |
C2 |
N1 |
0.0 |
0.2 |
| C3 |
N3 |
C4 |
N4 |
0.0 |
359.7 |
| N3 |
C4 |
N4 |
S1 |
180.0 |
180.0 |
| N4 |
C4 |
S1 |
C6 |
145.0 |
360.0 |
| C8 |
C3 |
N1 |
N3 |
180.0 |
180.0 |
| N1 |
C3 |
C8 |
H81C |
334.8 |
90.0 |
| N1 |
C3 |
C8 |
H82C |
94.8 |
210.0 |
| N1 |
C3 |
C8 |
H83C |
214.9 |
330.0 |
| N1 |
C3 |
N3 |
C4 |
360.0 |
0.3 |
| N1 |
C3 |
C8 |
N3 |
180.0 |
180.0 |
| C8 |
C3 |
N3 |
C4 |
180.0 |
180.2 |
| H81C |
C8 |
C3 |
H82C |
240.0 |
240.0 |
| H81C |
C8 |
C3 |
H83C |
120.0 |
120.0 |
| H82C |
C8 |
C3 |
H83C |
240.0 |
240.0 |
| N4 |
C4 |
N3 |
C3 |
0.0 |
359.7 |
| N1 |
C3 |
N3 |
C8 |
180.0 |
180.0 |
| N3 |
C3 |
C8 |
H81C |
154.8 |
270.0 |
| N3 |
C3 |
C8 |
H82C |
274.8 |
30.0 |
| N3 |
C3 |
C8 |
H83C |
34.9 |
150.0 |
| C3 |
N3 |
C4 |
S1 |
180.0 |
179.7 |
| N4 |
C4 |
N3 |
S1 |
180.0 |
180.0 |
| N3 |
C4 |
S1 |
C6 |
325.0 |
180.0 |
| N4 |
C4 |
S1 |
N3 |
180.0 |
180.0 |
| C4 |
S1 |
C6 |
H61C |
321.1 |
300.0 |
| C4 |
S1 |
C6 |
H62C |
81.1 |
60.0 |
| C4 |
S1 |
C6 |
H63C |
201.2 |
180.0 |
| H61C |
C6 |
S1 |
H62C |
240.0 |
240.0 |
| H61C |
C6 |
S1 |
H63C |
120.0 |
120.0 |
| H62C |
C6 |
S1 |
H63C |
240.0 |
240.0 |
| H51N |
N5 |
C2 |
N4 |
19.0 |
0.0 |
| H51N |
N5 |
C2 |
N1 |
198.9 |
179.7 |
| C2 |
N5 |
H51N |
H52N |
120.0 |
179.7 |
| H52N |
N5 |
C2 |
N4 |
139.0 |
179.7 |
| H52N |
N5 |
C2 |
N1 |
318.9 |
359.4 |
| C2 |
N5 |
H52N |
H51N |
240.0 |
180.3 |
| S1 |
C6 |
H61C |
H62C |
120.0 |
120.0 |
| S1 |
C6 |
H61C |
H63C |
240.0 |
240.0 |
| H62C |
C6 |
H61C |
H63C |
120.0 |
120.0 |
| S1 |
C6 |
H62C |
H61C |
240.0 |
240.0 |
| S1 |
C6 |
H62C |
H63C |
120.0 |
120.0 |
| H61C |
C6 |
H62C |
H63C |
240.0 |
240.0 |
| S1 |
C6 |
H63C |
H61C |
120.0 |
120.0 |
| S1 |
C6 |
H63C |
H62C |
240.0 |
240.0 |
| H61C |
C6 |
H63C |
H62C |
120.0 |
120.0 |
| H81C |
C8 |
C3 |
N3 |
154.8 |
270.0 |
| C3 |
C8 |
H81C |
H82C |
120.0 |
120.0 |
| C3 |
C8 |
H81C |
H83C |
240.0 |
240.0 |
| H82C |
C8 |
H81C |
H83C |
120.0 |
120.0 |
| H82C |
C8 |
C3 |
N3 |
274.8 |
30.0 |
| C3 |
C8 |
H82C |
H81C |
240.0 |
240.0 |
| C3 |
C8 |
H82C |
H83C |
120.0 |
120.0 |
| H81C |
C8 |
H82C |
H83C |
240.0 |
240.0 |
| H83C |
C8 |
C3 |
N3 |
34.9 |
150.0 |
| C3 |
C8 |
H83C |
H81C |
120.0 |
120.0 |
| C3 |
C8 |
H83C |
H82C |
240.0 |
240.0 |
| H81C |
C8 |
H83C |
H82C |
120.0 |
120.0 |