PDB Chemical Component ZYV

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for ZYV

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C5	N7	1.323	1.379
C5	C4	1.379	1.405
C5	C6	1.383	1.396
N7	C8	1.331	1.353
C8	N9	1.328	1.304
N9	C4	1.324	1.346
C4	N3	1.338	1.337
N3	C2	1.319	1.315
C2	N1	1.321	1.321
N1	C6	1.338	1.331
C6	N6	1.399	1.385
N6	CAG	1.470	1.471
N6	CAF	1.464	1.470
CAG	CAP	1.534	1.531
CAF	CAE	1.521	1.531
CAE	OAL	1.433	1.430
OAL	CAP	1.439	1.431
CAP	CAD	1.519	1.530
CAD	NAA	1.468	1.469
N7	H7	1.000	0.970
C8	H8	1.080	1.080
C2	H2	1.080	1.080
CAG	HAG1	1.100	1.090
CAG	HAG2	1.100	1.089
CAF	HAF1	1.100	1.090
CAF	HAF2	1.100	1.090
CAP	HAP	1.100	1.089
CAE	HAE1	1.101	1.090
CAE	HAE2	1.100	1.090
CAD	HAD1	1.100	1.090
CAD	HAD2	1.100	1.090
NAA	HAA1	1.000	1.008
NAA	HAA2	1.000	1.009

Bond Angles for ZYV

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N7	C5	C4	107.4	106.1
N7	C5	C6	133.9	135.3
C5	N7	C8	107.9	107.2
C5	N7	H7	126.1	126.4
C4	C5	C6	118.7	118.6
C5	C4	N9	107.4	106.9
C5	C4	N3	119.5	118.6
C5	C6	N1	118.6	118.5
C5	C6	N6	121.5	120.7
N7	C8	N9	109.5	110.1
C8	N7	H7	126.1	126.4
N7	C8	H8	125.3	124.9
C8	N9	C4	107.8	109.8
N9	C8	H8	125.2	125.0
N9	C4	N3	133.1	134.5
C4	N3	C2	120.4	120.6
N3	C2	N1	121.5	122.5
N3	C2	H2	119.3	118.7
C2	N1	C6	121.2	121.1
N1	C2	H2	119.2	118.8
N1	C6	N6	119.9	120.8
C6	N6	CAG	123.0	111.0
C6	N6	CAF	121.5	111.0
CAG	N6	CAF	114.8	110.7
N6	CAG	CAP	109.1	109.2
N6	CAG	HAG1	109.6	109.5
N6	CAG	HAG2	109.7	109.5
N6	CAF	CAE	110.5	109.2
N6	CAF	HAF1	109.1	109.6
N6	CAF	HAF2	108.9	109.5
CAG	CAP	OAL	117.0	109.2
CAG	CAP	CAD	110.5	109.6
CAP	CAG	HAG1	109.6	109.5
CAP	CAG	HAG2	109.7	109.5
CAG	CAP	HAP	100.4	109.5
CAF	CAE	OAL	111.4	109.2
CAE	CAF	HAF1	109.1	109.5
CAE	CAF	HAF2	108.9	109.5
CAF	CAE	HAE1	108.8	109.5
CAF	CAE	HAE2	108.4	109.5
CAE	OAL	CAP	107.1	113.7
OAL	CAE	HAE1	108.8	109.5
OAL	CAE	HAE2	108.4	109.5
OAL	CAP	CAD	96.5	109.5
OAL	CAP	HAP	113.6	109.5
CAP	CAD	NAA	108.9	109.5
CAD	CAP	HAP	119.8	109.6
CAP	CAD	HAD1	109.7	109.4
CAP	CAD	HAD2	109.8	109.4
NAA	CAD	HAD1	109.6	109.5
NAA	CAD	HAD2	109.8	109.5
CAD	NAA	HAA1	109.5	111.0
CAD	NAA	HAA2	109.5	110.9
HAG1	CAG	HAG2	109.2	109.6
HAF1	CAF	HAF2	110.2	109.5
HAE1	CAE	HAE2	111.0	109.6
HAD1	CAD	HAD2	109.1	109.5
HAA1	NAA	HAA2	109.5	111.0

Torsion Angles for ZYV

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C4	C5	N7	C6	180.2	179.7
N7	C5	C4	N9	0.2	0.0
N7	C5	C4	N3	180.1	180.1
N7	C5	C6	N1	179.8	180.1
N7	C5	C6	N6	0.7	359.9
C5	N7	C8	N9	0.1	360.0
C8	N7	C5	H7	180.0	180.0
C5	N7	C8	H8	180.0	180.0
N7	C5	C4	C6	179.8	180.3
C4	C5	N7	C8	359.8	360.0
C4	C5	N7	H7	179.9	180.0
C4	C5	C6	N1	359.5	0.4
C4	C5	C6	N6	180.4	180.3
C8	N9	C4	C5	359.8	360.0
N9	C4	C5	N3	180.1	179.9
C5	C4	N3	C2	359.8	360.0
N7	C5	C6	C4	180.3	179.6
C6	C5	N7	C8	179.6	180.3
C6	C5	N7	H7	359.6	0.4
C6	C5	C4	N9	180.4	179.7
C6	C5	C4	N3	0.3	359.8
C2	N1	C6	C5	0.5	359.6
N1	C6	C5	N6	179.1	180.1
C5	C6	N6	CAG	10.1	180.0
C5	C6	N6	CAF	180.0	303.6
C8	N7	C5	C4	359.8	360.0
C8	N7	C5	C6	179.6	180.3
C5	N7	C8	H7	180.0	180.0
N7	C8	N9	C4	0.1	0.0
N9	C8	N7	H8	180.0	180.0
C5	C4	N9	C8	359.8	360.0
N9	C8	N7	H7	180.0	179.9
N7	C8	N9	H8	180.0	180.0
C8	N9	C4	N3	180.0	179.9
N9	C4	C5	C6	180.4	179.7
C5	C4	N9	N3	179.8	180.1
C4	N9	C8	H8	180.1	180.0
N9	C4	N3	C2	179.7	180.0
N3	C4	C5	C6	0.3	359.8
C5	C4	N3	N9	180.2	179.9
C4	N3	C2	N1	0.2	0.1
C4	N3	C2	H2	180.2	180.1
N3	C2	N1	C6	359.6	0.2
N1	C2	N3	H2	180.0	180.0
C5	C6	N1	C2	0.5	359.6
N3	C2	N1	H2	180.0	180.0
C2	N1	C6	N6	179.7	179.7
C5	C6	N1	N6	180.9	179.9
C6	N1	C2	H2	179.6	180.2
N1	C6	N6	CAG	191.0	359.9
N1	C6	N6	CAF	0.8	123.5
C5	C6	N6	N1	179.1	180.2
CAG	N6	C6	CAF	190.1	236.4
C6	N6	CAG	CAP	215.0	182.4
C6	N6	CAG	HAG1	335.0	302.3
C6	N6	CAG	HAG2	94.8	62.5
C6	N6	CAF	CAE	138.2	177.6
C6	N6	CAF	HAF1	258.2	297.6
C6	N6	CAF	HAF2	18.6	57.7
C6	N6	CAG	CAF	170.5	123.8
CAG	N6	CAF	CAE	308.8	301.3
CAG	N6	CAF	HAF1	68.9	61.3
CAG	N6	CAF	HAF2	189.3	181.5
N6	CAG	CAP	OAL	311.1	303.1
N6	CAG	CAP	CAD	60.2	63.1
CAP	CAG	N6	HAG1	240.0	240.1
CAP	CAG	N6	HAG2	120.2	119.9
N6	CAG	CAP	HAP	187.7	183.3
HAG1	CAG	N6	HAG2	240.2	239.8
C6	N6	CAF	CAG	189.4	236.3
CAF	N6	CAG	CAP	44.5	58.7
CAF	N6	CAG	HAG1	164.5	178.5
CAF	N6	CAG	HAG2	284.3	298.7
N6	CAF	CAE	OAL	59.6	56.9
CAE	CAF	N6	HAF1	240.0	240.0
CAE	CAF	N6	HAF2	119.6	119.9
N6	CAF	CAE	HAE1	179.6	176.8
N6	CAF	CAE	HAE2	300.5	297.0
HAF1	CAF	N6	HAF2	239.6	239.9
CAP	CAG	N6	CAF	44.5	58.7
N6	CAG	CAP	HAG1	120.0	119.9
N6	CAG	CAP	HAG2	239.8	240.0
CAE	OAL	CAP	CAG	57.4	58.7
OAL	CAP	CAG	CAD	250.9	240.1
OAL	CAP	CAG	HAP	123.4	119.9
CAG	CAP	CAD	NAA	180.4	180.0
CAD	CAP	CAG	HAP	232.5	239.8
CAG	CAP	CAD	HAD1	300.3	300.0
CAG	CAP	CAD	HAD2	60.2	60.0
HAG1	CAG	CAP	HAG2	119.8	120.2
N6	CAF	CAE	HAF1	120.0	120.0
N6	CAF	CAE	HAF2	240.4	240.1
CAF	CAE	OAL	CAP	299.2	301.3
OAL	CAE	CAF	HAE1	240.0	240.1
OAL	CAE	CAF	HAE2	119.2	120.0
HAF1	CAF	CAE	HAF2	120.4	120.1
HAE1	CAE	CAF	HAE2	239.2	239.9
CAG	CAP	OAL	CAE	57.4	58.7
OAL	CAE	CAF	HAF1	299.6	296.9
OAL	CAE	CAF	HAF2	179.2	176.8
CAF	CAE	OAL	HAE1	120.0	119.9
CAF	CAE	OAL	HAE2	240.8	240.1
CAE	OAL	CAP	CAD	300.3	298.7
CAE	OAL	CAP	HAP	173.7	178.6
HAE1	CAE	OAL	HAE2	120.8	120.2
CAG	CAP	OAL	CAD	117.0	120.0
OAL	CAP	CAG	HAG1	191.1	183.2
OAL	CAP	CAG	HAG2	71.3	63.1
CAG	CAP	OAL	HAP	243.6	240.1
CAP	OAL	CAE	HAE1	179.2	181.4
CAP	OAL	CAE	HAE2	58.4	61.2
OAL	CAP	CAD	NAA	302.4	299.8
CAD	CAP	OAL	HAP	126.6	120.1
OAL	CAP	CAD	HAD1	62.4	59.8
OAL	CAP	CAD	HAD2	182.2	179.8
CAG	CAP	CAD	OAL	237.9	240.2
CAD	CAP	CAG	HAG1	300.2	303.2
CAD	CAP	CAG	HAG2	180.4	183.0
CAG	CAP	CAD	HAP	115.9	120.2
OAL	CAP	CAD	HAP	238.0	239.9
NAA	CAD	CAP	HAD1	240.0	240.0
NAA	CAD	CAP	HAD2	120.2	120.1
CAP	CAD	NAA	HAA1	12.1	56.0
CAP	CAD	NAA	HAA2	132.1	180.0
HAD1	CAD	CAP	HAD2	240.2	240.0
NAA	CAD	CAP	HAP	64.4	59.9
CAP	CAD	NAA	HAD1	120.0	120.0
CAP	CAD	NAA	HAD2	239.8	240.0
HAD1	CAD	NAA	HAD2	119.8	120.0
HAA1	NAA	CAD	HAA2	240.0	236.0
H7	N7	C5	C4	179.9	180.0
H7	N7	C5	C6	359.6	0.4
C5	N7	H7	C8	179.9	179.9
H7	N7	C8	N9	180.0	179.9
H7	N7	C8	H8	360.0	360.0
N7	C8	H8	N9	180.0	180.0
H8	C8	N7	H7	360.0	360.0
H8	C8	N9	C4	180.1	180.0
N3	C2	H2	N1	180.0	180.0
H2	C2	N1	C6	179.6	180.2
HAG1	CAG	N6	CAF	164.5	178.5
N6	CAG	HAG1	CAP	240.3	240.3
N6	CAG	HAG1	HAG2	120.2	120.2
HAG1	CAG	CAP	OAL	191.1	183.2
HAG1	CAG	CAP	CAD	300.2	303.2
CAP	CAG	HAG1	HAG2	239.8	239.9
HAG1	CAG	CAP	HAP	67.7	63.4
HAG2	CAG	N6	CAF	284.3	298.7
N6	CAG	HAG2	CAP	119.8	119.8
N6	CAG	HAG2	HAG1	239.9	239.9
HAG2	CAG	CAP	OAL	71.3	63.1
HAG2	CAG	CAP	CAD	180.4	183.0
CAP	CAG	HAG2	HAG1	120.1	120.1
HAG2	CAG	CAP	HAP	307.9	303.2
N6	CAF	HAF1	CAE	239.1	240.2
N6	CAF	HAF1	HAF2	119.6	120.1
HAF1	CAF	CAE	OAL	299.6	296.9
CAE	CAF	HAF1	HAF2	240.4	239.9
HAF1	CAF	CAE	HAE1	59.6	56.8
HAF1	CAF	CAE	HAE2	180.4	176.9
N6	CAF	HAF2	CAE	120.6	119.7
N6	CAF	HAF2	HAF1	240.3	239.9
HAF2	CAF	CAE	OAL	179.2	176.8
CAE	CAF	HAF2	HAF1	119.7	120.1
HAF2	CAF	CAE	HAE1	299.2	296.7
HAF2	CAF	CAE	HAE2	60.0	56.8
CAG	CAP	HAP	OAL	125.8	119.7
CAG	CAP	HAP	CAD	238.9	239.8
HAP	CAP	CAG	HAG1	67.7	63.4
HAP	CAP	CAG	HAG2	307.9	303.2
OAL	CAP	HAP	CAD	113.1	120.1
HAP	CAP	CAD	NAA	64.4	59.9
HAP	CAP	CAD	HAD1	184.4	179.9
HAP	CAP	CAD	HAD2	304.2	299.8
CAF	CAE	HAE1	OAL	238.4	240.3
HAE1	CAE	CAF	HAF1	59.6	56.8
HAE1	CAE	CAF	HAF2	299.2	296.7
CAF	CAE	HAE1	HAE2	119.2	120.1
HAE1	CAE	OAL	CAP	179.2	181.4
OAL	CAE	HAE1	HAE2	240.8	239.8
CAF	CAE	HAE2	OAL	121.0	119.8
HAE2	CAE	CAF	HAF1	180.4	176.9
HAE2	CAE	CAF	HAF2	60.0	56.8
CAF	CAE	HAE2	HAE1	240.5	239.9
HAE2	CAE	OAL	CAP	58.4	61.2
OAL	CAE	HAE2	HAE1	119.5	120.2
CAP	CAD	HAD1	NAA	240.5	240.0
HAD1	CAD	CAP	HAP	184.4	179.9
CAP	CAD	HAD1	HAD2	120.3	119.9
NAA	CAD	HAD1	HAD2	239.8	239.9
HAD1	CAD	NAA	HAA1	252.1	296.1
HAD1	CAD	NAA	HAA2	12.1	60.0
CAP	CAD	HAD2	NAA	119.7	120.0
HAD2	CAD	CAP	HAP	304.2	299.8
CAP	CAD	HAD2	HAD1	239.8	240.1
NAA	CAD	HAD2	HAD1	120.1	120.0
HAD2	CAD	NAA	HAA1	132.3	176.0
HAD2	CAD	NAA	HAA2	252.3	300.0
HAA1	NAA	CAD	HAD1	252.1	296.1
HAA1	NAA	CAD	HAD2	132.3	176.0
CAD	NAA	HAA1	HAA2	120.0	123.9
HAA2	NAA	CAD	HAD1	12.1	60.0
HAA2	NAA	CAD	HAD2	252.3	300.0
CAD	NAA	HAA2	HAA1	240.0	236.0