PDB Chemical Component ZYU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ZYU
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CAO |
CAN |
1.519 |
1.531 |
| CAO |
N6 |
1.456 |
1.470 |
| CAN |
OAL |
1.438 |
1.430 |
| OAL |
CAK |
1.439 |
1.430 |
| CAK |
CAP |
1.522 |
1.531 |
| CAP |
N6 |
1.460 |
1.470 |
| C6 |
N1 |
1.335 |
1.329 |
| C6 |
C5 |
1.377 |
1.404 |
| C6 |
N6 |
1.380 |
1.384 |
| N1 |
C2 |
1.318 |
1.321 |
| C2 |
N3 |
1.317 |
1.317 |
| N3 |
C4 |
1.332 |
1.329 |
| C4 |
C5 |
1.368 |
1.406 |
| C4 |
N9 |
1.324 |
1.372 |
| C5 |
N7 |
1.321 |
1.354 |
| N7 |
C8 |
1.324 |
1.301 |
| C8 |
N9 |
1.327 |
1.363 |
| CAO |
HAO1 |
1.100 |
1.091 |
| CAO |
HAO2 |
1.100 |
1.090 |
| CAN |
HAN1 |
1.100 |
1.090 |
| CAN |
HAN2 |
1.100 |
1.091 |
| CAK |
HAK1 |
1.100 |
1.090 |
| CAK |
HAK2 |
1.101 |
1.090 |
| CAP |
HAP1 |
1.100 |
1.090 |
| CAP |
HAP2 |
1.100 |
1.089 |
| C2 |
H2 |
1.080 |
1.080 |
| N9 |
H9 |
1.000 |
0.969 |
| C8 |
H8 |
1.080 |
1.080 |
Bond Angles for ZYU
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAN |
CAO |
N6 |
109.0 |
109.3 |
| CAO |
CAN |
OAL |
114.6 |
109.3 |
| CAN |
CAO |
HAO1 |
109.6 |
109.5 |
| CAN |
CAO |
HAO2 |
109.7 |
109.5 |
| CAO |
CAN |
HAN1 |
107.8 |
109.5 |
| CAO |
CAN |
HAN2 |
106.6 |
109.5 |
| CAO |
N6 |
CAP |
111.5 |
110.7 |
| CAO |
N6 |
C6 |
125.1 |
111.0 |
| N6 |
CAO |
HAO1 |
109.6 |
109.5 |
| N6 |
CAO |
HAO2 |
109.7 |
109.5 |
| CAN |
OAL |
CAK |
103.7 |
113.8 |
| OAL |
CAN |
HAN1 |
107.8 |
109.5 |
| OAL |
CAN |
HAN2 |
106.6 |
109.5 |
| OAL |
CAK |
CAP |
113.9 |
109.3 |
| OAL |
CAK |
HAK1 |
108.0 |
109.4 |
| OAL |
CAK |
HAK2 |
107.0 |
109.5 |
| CAK |
CAP |
N6 |
109.4 |
109.3 |
| CAP |
CAK |
HAK1 |
108.0 |
109.5 |
| CAP |
CAK |
HAK2 |
107.0 |
109.5 |
| CAK |
CAP |
HAP1 |
109.5 |
109.5 |
| CAK |
CAP |
HAP2 |
109.5 |
109.5 |
| CAP |
N6 |
C6 |
122.4 |
111.0 |
| N6 |
CAP |
HAP1 |
109.5 |
109.5 |
| N6 |
CAP |
HAP2 |
109.5 |
109.5 |
| N1 |
C6 |
C5 |
119.6 |
118.5 |
| N1 |
C6 |
N6 |
121.8 |
120.7 |
| C6 |
N1 |
C2 |
120.0 |
121.2 |
| C5 |
C6 |
N6 |
118.4 |
120.8 |
| C6 |
C5 |
C4 |
118.7 |
118.2 |
| C6 |
C5 |
N7 |
133.5 |
134.7 |
| N1 |
C2 |
N3 |
121.7 |
122.4 |
| N1 |
C2 |
H2 |
119.1 |
118.8 |
| C2 |
N3 |
C4 |
120.9 |
120.7 |
| N3 |
C2 |
H2 |
119.1 |
118.8 |
| N3 |
C4 |
C5 |
119.1 |
119.0 |
| N3 |
C4 |
N9 |
134.0 |
134.9 |
| C5 |
C4 |
N9 |
106.9 |
106.0 |
| C4 |
C5 |
N7 |
107.8 |
107.1 |
| C4 |
N9 |
C8 |
108.3 |
107.4 |
| C4 |
N9 |
H9 |
125.8 |
126.3 |
| C5 |
N7 |
C8 |
108.0 |
109.5 |
| N7 |
C8 |
N9 |
108.9 |
110.0 |
| N7 |
C8 |
H8 |
125.5 |
125.0 |
| C8 |
N9 |
H9 |
125.8 |
126.3 |
| N9 |
C8 |
H8 |
125.5 |
125.0 |
| HAO1 |
CAO |
HAO2 |
109.1 |
109.5 |
| HAN1 |
CAN |
HAN2 |
113.6 |
109.5 |
| HAK1 |
CAK |
HAK2 |
113.0 |
109.6 |
| HAP1 |
CAP |
HAP2 |
109.4 |
109.5 |
Torsion Angles for ZYU
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAN |
CAO |
N6 |
CAP |
52.6 |
58.6 |
| CAN |
CAO |
N6 |
C6 |
222.0 |
182.4 |
| N6 |
CAO |
CAN |
HAO1 |
240.0 |
240.1 |
| N6 |
CAO |
CAN |
HAO2 |
120.2 |
120.0 |
| CAO |
CAN |
OAL |
CAK |
61.0 |
58.6 |
| OAL |
CAN |
CAO |
HAN1 |
240.0 |
240.0 |
| OAL |
CAN |
CAO |
HAN2 |
117.7 |
119.9 |
| HAO1 |
CAO |
CAN |
HAO2 |
240.2 |
239.9 |
| HAN1 |
CAN |
CAO |
HAN2 |
237.7 |
239.9 |
| N6 |
CAO |
CAN |
OAL |
300.7 |
303.2 |
| CAN |
CAO |
N6 |
HAO1 |
120.0 |
119.9 |
| CAN |
CAO |
N6 |
HAO2 |
239.9 |
240.1 |
| N6 |
CAO |
CAN |
HAN1 |
60.7 |
63.1 |
| N6 |
CAO |
CAN |
HAN2 |
183.0 |
183.2 |
| CAK |
CAP |
N6 |
CAO |
307.0 |
301.4 |
| CAP |
N6 |
CAO |
C6 |
190.6 |
236.2 |
| CAO |
N6 |
CAP |
HAP1 |
186.9 |
181.5 |
| CAO |
N6 |
CAP |
HAP2 |
67.0 |
61.3 |
| N1 |
C6 |
N6 |
CAO |
0.1 |
359.9 |
| C5 |
C6 |
N6 |
CAO |
185.5 |
179.7 |
| HAO1 |
CAO |
N6 |
HAO2 |
119.9 |
120.1 |
| OAL |
CAN |
CAO |
N6 |
300.7 |
303.2 |
| OAL |
CAN |
CAO |
HAO1 |
60.7 |
63.1 |
| OAL |
CAN |
CAO |
HAO2 |
180.6 |
183.2 |
| CAO |
CAN |
OAL |
HAN1 |
120.0 |
119.9 |
| CAO |
CAN |
OAL |
HAN2 |
242.3 |
240.1 |
| CAN |
OAL |
CAK |
CAP |
299.3 |
301.4 |
| CAN |
OAL |
CAK |
HAK1 |
59.3 |
61.3 |
| CAN |
OAL |
CAK |
HAK2 |
181.3 |
181.4 |
| HAN1 |
CAN |
OAL |
HAN2 |
122.3 |
120.1 |
| CAK |
OAL |
CAN |
HAN1 |
301.0 |
298.7 |
| CAK |
OAL |
CAN |
HAN2 |
178.7 |
178.6 |
| OAL |
CAK |
CAP |
N6 |
59.4 |
56.8 |
| CAP |
CAK |
OAL |
HAK1 |
240.0 |
240.1 |
| CAP |
CAK |
OAL |
HAK2 |
118.1 |
120.0 |
| OAL |
CAK |
CAP |
HAP1 |
179.4 |
176.8 |
| OAL |
CAK |
CAP |
HAP2 |
299.4 |
296.9 |
| HAK1 |
CAK |
OAL |
HAK2 |
238.1 |
239.9 |
| CAO |
N6 |
CAP |
CAK |
307.0 |
301.4 |
| OAL |
CAK |
CAP |
HAK1 |
120.0 |
119.9 |
| OAL |
CAK |
CAP |
HAK2 |
241.9 |
240.0 |
| CAK |
CAP |
N6 |
C6 |
137.3 |
177.6 |
| N6 |
CAP |
CAK |
HAP1 |
240.0 |
240.0 |
| N6 |
CAP |
CAK |
HAP2 |
120.0 |
119.9 |
| HAK1 |
CAK |
CAP |
HAK2 |
122.0 |
120.2 |
| HAP1 |
CAP |
CAK |
HAP2 |
240.1 |
239.9 |
| CAO |
N6 |
CAP |
C6 |
169.7 |
123.8 |
| CAP |
N6 |
CAO |
HAO1 |
292.6 |
298.6 |
| CAP |
N6 |
CAO |
HAO2 |
172.8 |
178.5 |
| N6 |
CAP |
CAK |
HAK1 |
299.4 |
296.9 |
| N6 |
CAP |
CAK |
HAK2 |
177.5 |
176.8 |
| CAK |
CAP |
N6 |
HAP1 |
120.0 |
119.9 |
| CAK |
CAP |
N6 |
HAP2 |
240.0 |
240.1 |
| N1 |
C6 |
N6 |
CAP |
168.3 |
123.6 |
| C5 |
C6 |
N6 |
CAP |
353.8 |
303.4 |
| HAP1 |
CAP |
N6 |
HAP2 |
119.9 |
120.2 |
| CAO |
N6 |
C6 |
N1 |
0.1 |
359.9 |
| CAP |
N6 |
C6 |
N1 |
168.3 |
123.6 |
| C5 |
C6 |
N1 |
N6 |
174.5 |
180.2 |
| N1 |
C6 |
C5 |
C4 |
3.0 |
0.0 |
| N1 |
C6 |
C5 |
N7 |
181.6 |
180.0 |
| C6 |
N1 |
C2 |
N3 |
2.6 |
360.0 |
| C6 |
N1 |
C2 |
H2 |
182.6 |
180.0 |
| CAO |
N6 |
C6 |
C5 |
185.5 |
179.7 |
| CAP |
N6 |
C6 |
C5 |
353.8 |
303.4 |
| N1 |
C6 |
C5 |
N6 |
185.3 |
179.8 |
| C5 |
C6 |
N1 |
C2 |
356.2 |
360.0 |
| N3 |
C4 |
C5 |
C6 |
358.9 |
360.0 |
| C6 |
C5 |
C4 |
N9 |
178.9 |
180.0 |
| C4 |
C5 |
C6 |
N7 |
181.4 |
180.1 |
| C6 |
C5 |
N7 |
C8 |
181.4 |
180.0 |
| CAO |
N6 |
C6 |
CAP |
191.7 |
236.3 |
| C6 |
N6 |
CAO |
HAO1 |
102.0 |
62.5 |
| C6 |
N6 |
CAO |
HAO2 |
342.1 |
302.4 |
| C6 |
N6 |
CAP |
HAP1 |
17.2 |
57.6 |
| C6 |
N6 |
CAP |
HAP2 |
257.3 |
297.5 |
| N1 |
C6 |
N6 |
C5 |
174.6 |
180.2 |
| N6 |
C6 |
N1 |
C2 |
181.7 |
179.8 |
| N6 |
C6 |
C5 |
C4 |
177.7 |
180.2 |
| N6 |
C6 |
C5 |
N7 |
356.3 |
0.2 |
| C2 |
N1 |
C6 |
C5 |
356.2 |
360.0 |
| C2 |
N1 |
C6 |
N6 |
181.7 |
179.8 |
| N1 |
C2 |
N3 |
C4 |
359.4 |
0.0 |
| N3 |
C2 |
N1 |
H2 |
180.0 |
180.0 |
| N1 |
C2 |
N3 |
H2 |
180.0 |
180.0 |
| C2 |
N3 |
C4 |
C5 |
359.9 |
360.0 |
| C2 |
N3 |
C4 |
N9 |
179.9 |
180.0 |
| C6 |
C5 |
C4 |
N3 |
358.9 |
360.0 |
| C4 |
N3 |
C2 |
H2 |
179.3 |
180.0 |
| C5 |
C4 |
N3 |
N9 |
180.0 |
180.0 |
| N3 |
C4 |
C5 |
N7 |
180.0 |
180.0 |
| N3 |
C4 |
N9 |
C8 |
180.0 |
180.0 |
| N3 |
C4 |
N9 |
H9 |
360.0 |
0.0 |
| C4 |
C5 |
C6 |
N6 |
177.7 |
180.2 |
| C6 |
C5 |
C4 |
N7 |
178.9 |
180.0 |
| N3 |
C4 |
C5 |
N9 |
180.0 |
180.0 |
| C5 |
C4 |
N9 |
C8 |
360.0 |
0.0 |
| C5 |
C4 |
N9 |
H9 |
180.0 |
180.0 |
| C4 |
C5 |
N7 |
C8 |
0.1 |
360.0 |
| N3 |
C4 |
N9 |
C5 |
180.0 |
180.0 |
| N9 |
C4 |
C5 |
N7 |
360.0 |
0.0 |
| N7 |
C8 |
N9 |
C4 |
0.1 |
360.0 |
| C8 |
N9 |
C4 |
H9 |
180.0 |
180.0 |
| C4 |
N9 |
C8 |
H8 |
180.1 |
180.0 |
| N7 |
C5 |
C6 |
N6 |
356.3 |
0.2 |
| C6 |
C5 |
N7 |
C4 |
181.3 |
180.0 |
| N7 |
C5 |
C4 |
N9 |
360.0 |
0.0 |
| C5 |
N7 |
C8 |
N9 |
359.9 |
0.1 |
| C5 |
N7 |
C8 |
H8 |
179.9 |
180.0 |
| C4 |
N9 |
C8 |
N7 |
0.1 |
360.0 |
| N7 |
C8 |
N9 |
H9 |
180.1 |
179.9 |
| N9 |
C8 |
N7 |
H8 |
180.0 |
180.1 |
| C4 |
N9 |
C8 |
H9 |
180.0 |
180.0 |
| N7 |
C8 |
N9 |
H8 |
180.0 |
179.9 |
| CAN |
CAO |
HAO1 |
N6 |
240.3 |
240.2 |
| HAO1 |
CAO |
CAN |
OAL |
60.7 |
63.1 |
| CAN |
CAO |
HAO1 |
HAO2 |
120.1 |
120.1 |
| HAO1 |
CAO |
CAN |
HAN1 |
180.7 |
183.1 |
| HAO1 |
CAO |
CAN |
HAN2 |
303.1 |
303.2 |
| HAO1 |
CAO |
N6 |
CAP |
292.6 |
298.6 |
| HAO1 |
CAO |
N6 |
C6 |
102.0 |
62.5 |
| N6 |
CAO |
HAO1 |
HAO2 |
239.8 |
239.9 |
| CAN |
CAO |
HAO2 |
N6 |
119.7 |
119.8 |
| HAO2 |
CAO |
CAN |
OAL |
180.6 |
183.2 |
| CAN |
CAO |
HAO2 |
HAO1 |
239.9 |
239.9 |
| HAO2 |
CAO |
CAN |
HAN1 |
300.5 |
303.2 |
| HAO2 |
CAO |
CAN |
HAN2 |
62.9 |
63.3 |
| HAO2 |
CAO |
N6 |
CAP |
172.8 |
178.5 |
| HAO2 |
CAO |
N6 |
C6 |
342.1 |
302.4 |
| N6 |
CAO |
HAO2 |
HAO1 |
120.2 |
120.1 |
| HAN1 |
CAN |
CAO |
N6 |
60.7 |
63.1 |
| CAO |
CAN |
HAN1 |
OAL |
235.8 |
240.2 |
| HAN1 |
CAN |
CAO |
HAO1 |
180.7 |
183.1 |
| HAN1 |
CAN |
CAO |
HAO2 |
300.5 |
303.2 |
| CAO |
CAN |
HAN1 |
HAN2 |
117.9 |
120.1 |
| HAN1 |
CAN |
OAL |
CAK |
301.0 |
298.7 |
| OAL |
CAN |
HAN1 |
HAN2 |
242.1 |
239.9 |
| HAN2 |
CAN |
CAO |
N6 |
183.0 |
183.2 |
| CAO |
CAN |
HAN2 |
OAL |
122.9 |
119.8 |
| HAN2 |
CAN |
CAO |
HAO1 |
303.1 |
303.2 |
| HAN2 |
CAN |
CAO |
HAO2 |
62.9 |
63.3 |
| CAO |
CAN |
HAN2 |
HAN1 |
241.4 |
239.9 |
| HAN2 |
CAN |
OAL |
CAK |
178.7 |
178.6 |
| OAL |
CAN |
HAN2 |
HAN1 |
118.5 |
120.1 |
| OAL |
CAK |
HAK1 |
CAP |
236.4 |
240.2 |
| OAL |
CAK |
HAK1 |
HAK2 |
118.2 |
120.1 |
| HAK1 |
CAK |
CAP |
N6 |
299.4 |
296.9 |
| CAP |
CAK |
HAK1 |
HAK2 |
241.8 |
239.9 |
| HAK1 |
CAK |
CAP |
HAP1 |
59.4 |
56.9 |
| HAK1 |
CAK |
CAP |
HAP2 |
179.4 |
177.0 |
| OAL |
CAK |
HAK2 |
CAP |
122.4 |
119.8 |
| OAL |
CAK |
HAK2 |
HAK1 |
241.2 |
240.0 |
| HAK2 |
CAK |
CAP |
N6 |
177.5 |
176.8 |
| CAP |
CAK |
HAK2 |
HAK1 |
118.8 |
120.1 |
| HAK2 |
CAK |
CAP |
HAP1 |
297.5 |
296.8 |
| HAK2 |
CAK |
CAP |
HAP2 |
57.4 |
56.8 |
| CAK |
CAP |
HAP1 |
N6 |
240.0 |
240.2 |
| HAP1 |
CAP |
CAK |
HAK1 |
59.4 |
56.9 |
| HAP1 |
CAP |
CAK |
HAK2 |
297.5 |
296.8 |
| CAK |
CAP |
HAP1 |
HAP2 |
120.0 |
120.0 |
| HAP1 |
CAP |
N6 |
C6 |
17.2 |
57.6 |
| N6 |
CAP |
HAP1 |
HAP2 |
240.0 |
239.9 |
| CAK |
CAP |
HAP2 |
N6 |
120.0 |
119.8 |
| HAP2 |
CAP |
CAK |
HAK1 |
179.4 |
177.0 |
| HAP2 |
CAP |
CAK |
HAK2 |
57.4 |
56.8 |
| CAK |
CAP |
HAP2 |
HAP1 |
240.0 |
240.0 |
| HAP2 |
CAP |
N6 |
C6 |
257.3 |
297.5 |
| N6 |
CAP |
HAP2 |
HAP1 |
120.0 |
120.2 |
| N1 |
C2 |
H2 |
N3 |
180.0 |
180.0 |
| H2 |
C2 |
N3 |
C4 |
179.3 |
180.0 |
| C4 |
N9 |
H9 |
C8 |
180.0 |
180.0 |
| H9 |
N9 |
C8 |
H8 |
0.0 |
0.0 |
| N7 |
C8 |
H8 |
N9 |
180.0 |
180.1 |
| H8 |
C8 |
N9 |
H9 |
0.0 |
0.0 |