PDB Chemical Component ZYL
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ZYL
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
OAC |
CAX |
1.227 |
1.218 |
OAD |
CAS |
1.251 |
1.217 |
CAQ |
CAT |
1.526 |
1.507 |
CAQ |
NAY |
1.481 |
1.465 |
CAG |
CAT |
1.386 |
1.383 |
CAG |
CAF |
1.387 |
1.382 |
CAX |
NAY |
1.396 |
1.346 |
CAX |
CAW |
1.389 |
1.416 |
CAT |
CAK |
1.387 |
1.382 |
CAF |
CAH |
1.387 |
1.381 |
CAS |
CAW |
1.528 |
1.465 |
CAS |
OAB |
1.248 |
1.349 |
NAY |
CAJ |
1.398 |
1.356 |
CAK |
CAU |
1.389 |
1.387 |
CAW |
CAV |
1.391 |
1.403 |
CAH |
CAU |
1.386 |
1.387 |
CAN |
CAM |
1.527 |
1.530 |
CAN |
CAO |
1.525 |
1.529 |
CAP |
CAO |
1.526 |
1.530 |
CAP |
OAR |
1.429 |
1.429 |
CAU |
OAR |
1.358 |
1.359 |
CAJ |
CAI |
1.392 |
1.353 |
CAM |
CAL |
1.528 |
1.530 |
CAA |
CAL |
1.529 |
1.531 |
CAV |
CAI |
1.392 |
1.404 |
CAV |
OAE |
1.360 |
1.352 |
CAA |
H1 |
1.100 |
1.090 |
CAA |
H2 |
1.100 |
1.090 |
CAA |
H3 |
1.100 |
1.090 |
OAB |
H4 |
0.951 |
0.967 |
OAE |
H5 |
0.950 |
0.966 |
CAF |
H6 |
1.080 |
1.081 |
CAG |
H7 |
1.080 |
1.080 |
CAH |
H8 |
1.080 |
1.079 |
CAI |
H9 |
1.080 |
1.080 |
CAJ |
H10 |
1.080 |
1.080 |
CAK |
H11 |
1.080 |
1.080 |
CAL |
H12 |
1.100 |
1.091 |
CAL |
H13 |
1.100 |
1.089 |
CAM |
H14 |
1.100 |
1.091 |
CAM |
H15 |
1.100 |
1.090 |
CAN |
H16 |
1.100 |
1.091 |
CAN |
H17 |
1.100 |
1.090 |
CAO |
H18 |
1.100 |
1.090 |
CAO |
H19 |
1.100 |
1.090 |
CAP |
H20 |
1.100 |
1.090 |
CAP |
H21 |
1.100 |
1.090 |
CAQ |
H22 |
1.100 |
1.089 |
CAQ |
H23 |
1.100 |
1.090 |
Bond Angles for ZYL
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
OAC |
CAX |
NAY |
120.0 |
120.1 |
OAC |
CAX |
CAW |
119.5 |
120.1 |
OAD |
CAS |
CAW |
117.5 |
120.0 |
CAT |
CAQ |
NAY |
111.4 |
109.5 |
CAG |
CAT |
CAQ |
120.2 |
120.0 |
CAT |
CAQ |
H22 |
109.0 |
109.5 |
CAT |
CAQ |
H23 |
109.0 |
109.5 |
CAQ |
NAY |
CAX |
120.1 |
119.3 |
NAY |
CAQ |
H22 |
109.0 |
109.5 |
NAY |
CAQ |
H23 |
109.0 |
109.5 |
CAG |
CAT |
CAK |
119.9 |
120.0 |
CAT |
CAG |
H7 |
120.0 |
119.9 |
CAG |
CAF |
CAH |
120.2 |
120.1 |
CAG |
CAF |
H6 |
119.9 |
120.0 |
CAT |
CAK |
CAU |
120.1 |
119.9 |
CAT |
CAK |
H11 |
119.9 |
120.1 |
CAF |
CAH |
CAU |
119.9 |
119.9 |
CAH |
CAF |
H6 |
119.9 |
119.9 |
CAF |
CAH |
H8 |
120.0 |
120.0 |
CAS |
CAW |
CAV |
120.9 |
120.7 |
CAS |
OAB |
H4 |
109.5 |
117.0 |
NAY |
CAJ |
H10 |
120.0 |
119.3 |
CAH |
CAU |
CAK |
119.9 |
119.9 |
CAK |
CAU |
OAR |
120.0 |
120.1 |
CAU |
CAK |
H11 |
119.9 |
120.0 |
CAH |
CAU |
OAR |
120.0 |
120.0 |
CAU |
CAH |
H8 |
120.1 |
120.0 |
CAN |
CAM |
H14 |
109.0 |
109.5 |
CAN |
CAM |
H15 |
109.0 |
109.5 |
CAO |
CAN |
H16 |
109.1 |
109.5 |
CAO |
CAN |
H17 |
109.1 |
109.5 |
CAN |
CAO |
H18 |
109.1 |
109.5 |
CAN |
CAO |
H19 |
109.1 |
109.5 |
CAP |
CAO |
H18 |
109.1 |
109.5 |
CAP |
CAO |
H19 |
109.1 |
109.4 |
OAR |
CAP |
H20 |
109.8 |
109.5 |
OAR |
CAP |
H21 |
109.8 |
109.5 |
CAJ |
CAI |
H9 |
119.9 |
120.1 |
CAM |
CAL |
H12 |
109.1 |
109.4 |
CAM |
CAL |
H13 |
109.1 |
109.5 |
CAL |
CAA |
H1 |
109.5 |
109.4 |
CAL |
CAA |
H2 |
109.5 |
109.5 |
CAL |
CAA |
H3 |
109.5 |
109.5 |
CAA |
CAL |
H12 |
109.2 |
109.5 |
CAA |
CAL |
H13 |
109.1 |
109.5 |
CAV |
CAI |
H9 |
119.9 |
119.9 |
CAV |
OAE |
H5 |
109.5 |
114.0 |
H1 |
CAA |
H2 |
109.5 |
109.5 |
H1 |
CAA |
H3 |
109.5 |
109.5 |
H2 |
CAA |
H3 |
109.4 |
109.5 |
H12 |
CAL |
H13 |
109.4 |
109.5 |
H14 |
CAM |
H15 |
109.5 |
109.4 |
H16 |
CAN |
H17 |
109.5 |
109.4 |
H18 |
CAO |
H19 |
109.5 |
109.5 |
H20 |
CAP |
H21 |
109.4 |
109.5 |
H22 |
CAQ |
H23 |
109.5 |
109.4 |
Torsion Angles for ZYL
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CAQ |
NAY |
CAX |
OAC |
359.1 |
0.1 |
OAD |
CAS |
CAW |
CAV |
201.3 |
360.0 |
OAD |
CAS |
OAB |
H4 |
360.0 |
0.0 |
CAT |
CAQ |
NAY |
CAX |
85.8 |
90.0 |
NAY |
CAQ |
CAT |
H22 |
239.7 |
239.9 |
NAY |
CAQ |
CAT |
H23 |
120.3 |
120.0 |
CAG |
CAT |
CAQ |
CAK |
179.5 |
180.0 |
CAQ |
CAT |
CAG |
H7 |
0.1 |
360.0 |
CAQ |
CAT |
CAK |
CAU |
179.8 |
180.3 |
CAQ |
CAT |
CAK |
H11 |
359.7 |
359.7 |
H22 |
CAQ |
CAT |
H23 |
240.6 |
240.0 |
OAC |
CAX |
NAY |
CAQ |
359.1 |
0.1 |
CAG |
CAT |
CAQ |
NAY |
286.2 |
90.0 |
CAT |
CAQ |
NAY |
H22 |
120.3 |
120.0 |
CAT |
CAQ |
NAY |
H23 |
239.7 |
240.0 |
CAQ |
NAY |
CAJ |
H10 |
0.6 |
0.0 |
H22 |
CAQ |
NAY |
H23 |
119.4 |
120.0 |
CAG |
CAT |
CAQ |
H22 |
46.5 |
210.0 |
CAG |
CAT |
CAQ |
H23 |
165.9 |
330.0 |
CAT |
CAG |
CAF |
CAH |
0.3 |
0.0 |
CAT |
CAG |
CAF |
H6 |
180.3 |
179.7 |
CAG |
CAT |
CAK |
CAU |
0.3 |
0.3 |
CAG |
CAT |
CAK |
H11 |
180.3 |
179.7 |
CAG |
CAF |
CAH |
CAU |
359.9 |
359.7 |
CAH |
CAF |
CAG |
H6 |
180.0 |
180.3 |
CAG |
CAF |
CAH |
H8 |
179.9 |
179.7 |
OAC |
CAX |
NAY |
CAW |
179.5 |
180.3 |
CAX |
NAY |
CAQ |
H22 |
325.5 |
330.0 |
CAX |
NAY |
CAQ |
H23 |
206.1 |
210.0 |
CAX |
NAY |
CAJ |
H10 |
179.6 |
180.0 |
OAC |
CAX |
CAW |
NAY |
180.5 |
179.7 |
CAQ |
NAY |
CAX |
CAW |
179.6 |
179.7 |
CAG |
CAT |
CAK |
CAQ |
180.5 |
180.0 |
CAK |
CAT |
CAG |
H7 |
179.6 |
180.0 |
CAH |
CAU |
CAK |
CAT |
360.0 |
359.4 |
CAT |
CAK |
CAU |
OAR |
179.8 |
180.0 |
CAU |
CAK |
CAT |
H11 |
180.0 |
180.6 |
CAG |
CAF |
CAH |
H6 |
180.0 |
179.7 |
CAF |
CAH |
CAU |
CAK |
359.9 |
0.6 |
CAF |
CAH |
CAU |
OAR |
180.1 |
180.0 |
CAU |
CAH |
CAF |
H8 |
180.0 |
180.0 |
OAC |
CAX |
CAW |
CAS |
0.3 |
360.0 |
CAW |
CAS |
OAB |
H4 |
180.1 |
180.0 |
OAC |
CAX |
NAY |
CAJ |
180.1 |
180.0 |
NAY |
CAJ |
CAI |
H9 |
180.1 |
180.0 |
CAT |
CAK |
CAU |
H11 |
180.0 |
179.4 |
CAH |
CAU |
CAK |
OAR |
180.2 |
179.4 |
CAK |
CAU |
CAH |
H8 |
179.9 |
180.5 |
OAC |
CAX |
CAW |
CAV |
179.9 |
180.0 |
CAW |
CAV |
CAI |
H9 |
180.0 |
180.1 |
CAW |
CAV |
OAE |
H5 |
180.0 |
180.0 |
CAT |
CAK |
CAU |
CAH |
360.0 |
359.4 |
CAU |
CAH |
CAF |
H6 |
179.9 |
180.0 |
CAF |
CAH |
CAU |
H8 |
180.0 |
180.0 |
CAK |
CAU |
CAH |
OAR |
179.8 |
180.6 |
CAH |
CAU |
CAK |
H11 |
180.0 |
180.0 |
CAN |
CAM |
CAL |
H12 |
350.0 |
60.0 |
CAN |
CAM |
CAL |
H13 |
109.5 |
300.0 |
H14 |
CAM |
CAN |
H15 |
240.5 |
119.9 |
CAO |
CAN |
CAM |
H14 |
13.9 |
60.0 |
CAO |
CAN |
CAM |
H15 |
133.4 |
300.1 |
CAP |
CAO |
CAN |
H18 |
239.8 |
240.0 |
CAP |
CAO |
CAN |
H19 |
120.2 |
120.0 |
H16 |
CAN |
CAO |
H17 |
119.5 |
119.9 |
H18 |
CAO |
CAN |
H19 |
240.4 |
240.0 |
CAP |
CAO |
CAN |
H16 |
59.2 |
60.0 |
CAP |
CAO |
CAN |
H17 |
299.6 |
300.0 |
CAN |
CAO |
CAP |
H18 |
120.2 |
120.0 |
CAN |
CAO |
CAP |
H19 |
239.8 |
240.0 |
H18 |
CAO |
CAP |
H19 |
119.6 |
120.0 |
CAK |
CAU |
OAR |
CAP |
104.1 |
179.5 |
CAH |
CAU |
OAR |
CAP |
283.9 |
0.0 |
OAR |
CAP |
CAO |
H18 |
61.3 |
60.0 |
OAR |
CAP |
CAO |
H19 |
301.8 |
300.0 |
H20 |
CAP |
OAR |
H21 |
120.3 |
120.0 |
CAH |
CAU |
OAR |
CAK |
179.8 |
180.6 |
OAR |
CAU |
CAK |
H11 |
359.8 |
0.6 |
OAR |
CAU |
CAH |
H8 |
0.1 |
360.0 |
CAU |
OAR |
CAP |
H20 |
70.5 |
60.0 |
CAU |
OAR |
CAP |
H21 |
310.2 |
300.0 |
CAV |
CAI |
CAJ |
H9 |
180.0 |
180.3 |
CAM |
CAL |
CAA |
H1 |
180.0 |
60.0 |
CAM |
CAL |
CAA |
H2 |
300.0 |
180.0 |
CAM |
CAL |
CAA |
H3 |
60.0 |
300.0 |
CAA |
CAL |
CAM |
H12 |
239.8 |
119.9 |
CAA |
CAL |
CAM |
H13 |
120.2 |
240.0 |
H12 |
CAL |
CAM |
H13 |
240.5 |
120.1 |
CAM |
CAL |
CAA |
H12 |
120.2 |
240.1 |
CAM |
CAL |
CAA |
H13 |
239.8 |
120.0 |
H1 |
CAA |
CAL |
H2 |
240.0 |
240.0 |
H1 |
CAA |
CAL |
H3 |
120.0 |
120.0 |
H2 |
CAA |
CAL |
H3 |
240.0 |
240.0 |
H12 |
CAL |
CAA |
H13 |
119.6 |
240.0 |
CAJ |
CAI |
CAV |
H9 |
180.0 |
179.7 |
CAI |
CAV |
OAE |
H5 |
0.1 |
0.1 |
CAL |
CAA |
H1 |
H2 |
120.0 |
120.0 |
CAL |
CAA |
H1 |
H3 |
240.0 |
240.0 |
H1 |
CAA |
CAL |
H12 |
59.8 |
180.0 |
H1 |
CAA |
CAL |
H13 |
300.2 |
300.0 |
H2 |
CAA |
H1 |
H3 |
120.0 |
120.1 |
CAL |
CAA |
H2 |
H1 |
240.0 |
240.0 |
CAL |
CAA |
H2 |
H3 |
120.0 |
120.0 |
H2 |
CAA |
CAL |
H12 |
179.8 |
300.0 |
H2 |
CAA |
CAL |
H13 |
60.2 |
60.0 |
H1 |
CAA |
H2 |
H3 |
240.0 |
240.0 |
CAL |
CAA |
H3 |
H1 |
120.0 |
120.0 |
CAL |
CAA |
H3 |
H2 |
240.0 |
240.0 |
H3 |
CAA |
CAL |
H12 |
299.8 |
60.0 |
H3 |
CAA |
CAL |
H13 |
180.2 |
180.0 |
H1 |
CAA |
H3 |
H2 |
120.0 |
120.1 |
CAG |
CAF |
H6 |
CAH |
180.0 |
180.3 |
H6 |
CAF |
CAH |
CAU |
179.9 |
180.0 |
H6 |
CAF |
CAH |
H8 |
360.0 |
0.1 |
H7 |
CAG |
CAT |
CAQ |
0.1 |
360.0 |
H7 |
CAG |
CAT |
CAK |
179.6 |
180.0 |
H7 |
CAG |
CAF |
CAH |
180.3 |
180.0 |
H7 |
CAG |
CAF |
H6 |
0.3 |
359.7 |
CAF |
CAH |
H8 |
CAU |
180.0 |
180.0 |
H8 |
CAH |
CAF |
H6 |
360.0 |
0.1 |
H8 |
CAH |
CAU |
CAK |
179.9 |
180.5 |
H8 |
CAH |
CAU |
OAR |
0.1 |
360.0 |
H10 |
CAJ |
CAI |
H9 |
0.1 |
359.9 |
CAT |
CAK |
H11 |
CAU |
180.0 |
180.6 |
H11 |
CAK |
CAU |
OAR |
359.8 |
0.6 |
CAM |
CAL |
H12 |
H13 |
119.3 |
240.0 |
H12 |
CAL |
CAA |
H1 |
59.8 |
180.0 |
H12 |
CAL |
CAA |
H2 |
179.8 |
300.0 |
H12 |
CAL |
CAA |
H3 |
299.8 |
60.0 |
CAA |
CAL |
H12 |
H13 |
240.6 |
120.0 |
CAM |
CAL |
H13 |
H12 |
240.7 |
120.0 |
H13 |
CAL |
CAA |
H1 |
300.2 |
300.0 |
H13 |
CAL |
CAA |
H2 |
60.2 |
60.0 |
H13 |
CAL |
CAA |
H3 |
180.2 |
180.0 |
CAA |
CAL |
H13 |
H12 |
119.4 |
240.0 |
CAN |
CAM |
H14 |
H15 |
119.2 |
240.0 |
H14 |
CAM |
CAL |
H12 |
229.7 |
180.0 |
H14 |
CAM |
CAL |
H13 |
349.3 |
60.0 |
CAN |
CAM |
H15 |
H14 |
240.8 |
119.9 |
H15 |
CAM |
CAL |
H12 |
110.3 |
300.0 |
H15 |
CAM |
CAL |
H13 |
229.8 |
179.9 |
H16 |
CAN |
CAM |
H14 |
134.2 |
180.0 |
H16 |
CAN |
CAM |
H15 |
253.6 |
60.1 |
CAO |
CAN |
H16 |
H17 |
240.7 |
240.0 |
H16 |
CAN |
CAO |
H18 |
179.4 |
180.0 |
H16 |
CAN |
CAO |
H19 |
298.9 |
300.0 |
H17 |
CAN |
CAM |
H14 |
253.7 |
299.9 |
H17 |
CAN |
CAM |
H15 |
13.2 |
180.0 |
CAO |
CAN |
H17 |
H16 |
119.3 |
120.0 |
H17 |
CAN |
CAO |
H18 |
59.9 |
60.0 |
H17 |
CAN |
CAO |
H19 |
179.4 |
180.1 |
H18 |
CAO |
CAN |
H16 |
179.4 |
180.0 |
H18 |
CAO |
CAN |
H17 |
59.9 |
60.0 |
CAN |
CAO |
H18 |
H19 |
119.4 |
120.0 |
CAP |
CAO |
H18 |
H19 |
240.7 |
240.1 |
H19 |
CAO |
CAN |
H16 |
298.9 |
300.0 |
H19 |
CAO |
CAN |
H17 |
179.4 |
180.1 |
CAN |
CAO |
H19 |
H18 |
240.6 |
240.0 |
CAP |
CAO |
H19 |
H18 |
119.3 |
120.0 |
H20 |
CAP |
CAO |
H18 |
181.2 |
180.0 |
H20 |
CAP |
CAO |
H19 |
61.6 |
60.0 |
OAR |
CAP |
H20 |
H21 |
239.4 |
240.0 |
H21 |
CAP |
CAO |
H18 |
301.5 |
300.0 |
H21 |
CAP |
CAO |
H19 |
181.9 |
180.0 |
OAR |
CAP |
H21 |
H20 |
120.6 |
120.0 |
CAT |
CAQ |
H22 |
NAY |
238.2 |
240.0 |
CAT |
CAQ |
H22 |
H23 |
119.1 |
120.0 |
H22 |
CAQ |
NAY |
CAX |
325.5 |
330.0 |
NAY |
CAQ |
H22 |
H23 |
240.9 |
240.0 |
CAT |
CAQ |
H23 |
NAY |
121.8 |
120.0 |
CAT |
CAQ |
H23 |
H22 |
240.9 |
240.0 |
H23 |
CAQ |
NAY |
CAX |
206.1 |
210.0 |
NAY |
CAQ |
H23 |
H22 |
119.1 |
120.0 |