PDB Chemical Component ZTD

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for ZTD

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CAA CAW 1.523 1.507
CAW CAK 1.363 1.414
CAW NAQ 1.322 1.301
CAK CAZ 1.329 1.355
NAQ OAT 1.418 1.209
OAT CAZ 1.350 1.340
CAZ CAM 1.509 1.506
CAM CAU 1.503 1.507
CAU OAB 1.213 1.213
CAU N 1.356 1.347
N CD2 1.487 1.474
N CA 1.476 1.471
CD2 CG 1.497 1.549
CG OD1 1.435 1.429
CG CB 1.503 1.551
CB CA 1.541 1.544
CA C 1.534 1.507
C O 1.234 1.213
C NAR 1.337 1.348
NAR CAL 1.483 1.465
CAL CAX 1.529 1.506
CAX CAF 1.409 1.384
CAX CAE 1.407 1.384
CAF CAH 1.397 1.380
CAH CAY 1.398 1.395
CAE CAG 1.400 1.380
CAG CAY 1.412 1.396
CAY CBA 1.513 1.477
CBA OAS 1.375 1.347
CBA OAD 1.238 1.215
CAI OAS 1.491 1.452
CAA HAA1 1.100 1.090
CAA HAA2 1.100 1.090
CAA HAA3 1.100 1.090
CAK HAK 1.080 1.080
CAM HAM1 1.100 1.091
CAM HAM2 1.099 1.090
CD2 HD21 1.100 1.089
CD2 HD22 1.100 1.091
CA HA 1.100 1.090
CG HG 1.100 1.089
OD1 HD1 0.950 0.967
CB HB1C 1.100 1.090
CB HB2C 1.100 1.090
NAR HAR 0.999 0.969
CAL HAL1 1.100 1.091
CAL HAL2 1.100 1.091
CAF HAF 1.080 1.080
CAE HAE 1.080 1.079
CAH HAH 1.080 1.079
CAG HAG 1.080 1.080
CAI HAI1 1.100 1.090
CAI HAI2 1.100 1.090
CAI HAI3 1.100 1.091

Bond Angles for ZTD

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CAA CAW CAK 126.8 126.8
CAA CAW NAQ 120.5 126.9
CAW CAA HAA1 109.5 109.4
CAW CAA HAA2 109.5 109.4
CAW CAA HAA3 109.4 109.5
CAK CAW NAQ 112.7 106.4
CAW CAK CAZ 107.9 104.0
CAW CAK HAK 126.0 128.0
CAW NAQ OAT 101.9 111.6
CAK CAZ OAT 106.3 106.4
CAK CAZ CAM 132.8 126.8
CAZ CAK HAK 126.0 127.9
NAQ OAT CAZ 111.1 111.6
OAT CAZ CAM 120.9 126.8
CAZ CAM CAU 104.3 109.5
CAZ CAM HAM1 110.8 109.5
CAZ CAM HAM2 110.8 109.5
CAM CAU OAB 117.6 120.0
CAM CAU N 123.1 120.0
CAU CAM HAM1 110.7 109.4
CAU CAM HAM2 110.7 109.5
OAB CAU N 119.3 120.0
CAU N CD2 123.8 125.7
CAU N CA 124.5 125.6
CD2 N CA 111.0 108.7
N CD2 CG 104.7 104.9
N CD2 HD21 110.6 110.4
N CD2 HD22 110.6 110.3
N CA CB 102.8 107.2
N CA C 108.7 109.8
N CA HA 112.9 109.9
CD2 CG OD1 104.2 111.0
CD2 CG CB 104.6 101.6
CG CD2 HD21 110.7 110.4
CG CD2 HD22 110.6 110.3
CD2 CG HG 111.8 111.0
OD1 CG CB 111.0 111.0
OD1 CG HG 112.8 110.9
CG OD1 HD1 109.5 114.0
CG CB CA 104.6 103.1
CB CG HG 111.8 111.1
CG CB HB1C 110.7 110.7
CG CB HB2C 110.7 110.7
CB CA C 108.0 110.0
CB CA HA 111.9 109.8
CA CB HB1C 110.6 110.8
CA CB HB2C 110.7 110.5
CA C O 121.5 120.0
CA C NAR 115.7 120.0
C CA HA 112.0 110.0
O C NAR 122.8 120.0
C NAR CAL 121.2 120.0
C NAR HAR 119.4 120.0
NAR CAL CAX 109.9 109.5
CAL NAR HAR 119.4 120.0
NAR CAL HAL1 109.4 109.5
NAR CAL HAL2 109.4 109.5
CAL CAX CAF 119.0 119.9
CAL CAX CAE 120.1 119.8
CAX CAL HAL1 109.3 109.4
CAX CAL HAL2 109.4 109.5
CAE CAX CAF 120.9 120.3
CAX CAF CAH 120.1 120.1
CAX CAF HAF 119.9 119.9
CAX CAE CAG 119.1 120.1
CAX CAE HAE 120.4 119.9
CAF CAH CAY 118.8 119.8
CAH CAF HAF 119.9 120.0
CAF CAH HAH 120.6 120.1
CAG CAY CAH 121.7 119.7
CAH CAY CBA 117.6 120.1
CAY CAH HAH 120.6 120.1
CAE CAG CAY 119.4 119.9
CAG CAE HAE 120.5 120.0
CAE CAG HAG 120.3 120.0
CAG CAY CBA 120.8 120.1
CAY CAG HAG 120.3 120.1
CAY CBA OAS 117.4 120.0
CAY CBA OAD 119.8 120.0
OAD CBA OAS 122.6 120.0
CBA OAS CAI 112.7 117.0
OAS CAI HAI1 109.5 109.5
OAS CAI HAI2 109.5 109.5
OAS CAI HAI3 109.5 109.4
HAA1 CAA HAA2 109.5 109.5
HAA1 CAA HAA3 109.5 109.5
HAA2 CAA HAA3 109.5 109.5
HAM1 CAM HAM2 109.5 109.5
HD21 CD2 HD22 109.5 110.4
HB1C CB HB2C 109.5 110.8
HAL1 CAL HAL2 109.5 109.5
HAI1 CAI HAI2 109.5 109.5
HAI1 CAI HAI3 109.5 109.5
HAI2 CAI HAI3 109.4 109.5

Torsion Angles for ZTD

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CAK CAW CAA NAQ 182.3 180.3
CAA CAW CAK CAZ 179.3 180.0
CAA CAW CAK HAK 359.3 359.9
CAA CAW NAQ OAT 180.9 180.1
HAA1 CAA CAW HAA2 240.0 240.1
HAA1 CAA CAW HAA3 120.0 120.0
HAA2 CAA CAW HAA3 240.0 240.0
CAA CAW CAK NAQ 177.8 179.7
CAK CAW CAA HAA1 182.3 90.1
CAK CAW CAA HAA2 302.3 210.0
CAK CAW CAA HAA3 62.3 330.0
CAK CAW NAQ OAT 358.9 359.8
CAW CAK CAZ OAT 358.9 359.8
CAW CAK CAZ CAM 177.8 180.0
CAZ CAK CAW HAK 180.0 180.1
CAA CAW NAQ CAK 182.0 180.3
NAQ CAW CAA HAA1 0.0 269.8
NAQ CAW CAA HAA2 120.0 29.7
NAQ CAW CAA HAA3 240.0 149.7
NAQ CAW CAK CAZ 1.5 0.2
NAQ CAW CAK HAK 181.5 180.1
CAW NAQ OAT CAZ 0.4 0.1
CAZ CAK CAW NAQ 1.5 0.2
CAW CAK CAZ HAK 180.0 179.9
NAQ OAT CAZ CAK 0.4 0.1
OAT CAZ CAK CAM 181.1 179.8
CAK CAZ CAM CAU 72.0 90.0
CAK CAZ CAM HAM1 191.2 209.9
CAK CAZ CAM HAM2 312.8 329.9
CAK CAZ OAT NAQ 0.4 0.1
NAQ OAT CAZ CAM 181.4 179.9
CAK CAZ OAT CAM 179.1 180.2
OAT CAZ CAK HAK 178.9 179.9
OAT CAZ CAM CAU 250.8 270.3
OAT CAZ CAM HAM1 10.0 30.2
OAT CAZ CAM HAM2 131.6 150.2
CAK CAZ CAM OAT 181.2 179.7
CAM CAZ CAK HAK 357.8 0.1
CAZ CAM CAU OAB 277.3 359.9
CAZ CAM CAU N 96.8 180.0
CAU CAM CAZ HAM1 240.8 240.1
CAU CAM CAZ HAM2 119.2 120.1
HAM1 CAM CAZ HAM2 238.4 240.0
CAZ CAM CAU HAM1 119.2 119.9
CAZ CAM CAU HAM2 240.8 239.9
OAB CAU CAM N 180.4 179.9
CAM CAU N CD2 7.9 359.9
CAM CAU N CA 177.8 179.7
HAM1 CAM CAU HAM2 121.6 120.0
CAM CAU OAB N 179.6 180.1
OAB CAU CAM HAM1 158.1 240.0
OAB CAU CAM HAM2 36.5 120.0
OAB CAU N CD2 187.4 180.0
OAB CAU N CA 357.3 359.8
CAM CAU N OAB 180.5 179.9
N CAU CAM HAM1 337.6 60.0
N CAU CAM HAM2 216.0 300.1
CD2 N CAU CA 190.1 180.2
CAU N CD2 CG 180.2 204.1
CAU N CD2 HD21 299.4 323.0
CAU N CD2 HD22 61.0 85.3
CAU N CA CB 201.5 178.8
CAU N CA C 315.8 298.3
CAU N CA HA 80.8 59.5
CAU N CD2 CA 171.1 179.8
CD2 N CA CB 12.5 358.6
CD2 N CA C 126.8 118.1
CD2 N CA HA 251.8 239.4
N CD2 CG OD1 89.0 81.1
N CD2 CG CB 332.4 323.1
CG CD2 N HD21 240.8 241.1
CG CD2 N HD22 119.2 118.8
N CD2 CG HG 211.2 204.9
HD21 CD2 N HD22 238.5 237.7
CAU N CA CD2 189.0 180.2
CA N CD2 CG 9.1 24.3
CA N CD2 HD21 128.3 143.2
CA N CD2 HD22 249.9 265.5
CG CB CA N 330.6 338.1
CB CA N C 245.7 240.5
CB CA N HA 120.7 119.3
N CA CB HB1C 211.4 219.6
N CA CB HB2C 89.8 96.4
N CA C O 321.3 341.5
N CA C NAR 142.8 161.5
C CA N HA 235.0 238.8
CG CD2 N CA 9.1 24.3
N CD2 CG HD21 119.2 118.9
N CD2 CG HD22 240.8 241.2
OD1 CG CD2 CB 116.6 118.0
OD1 CG CD2 HG 237.8 236.2
CD2 CG OD1 HD1 180.0 61.4
CD2 CG CB CA 35.7 35.3
CB CG CD2 HG 121.2 118.2
CD2 CG CB HB1C 154.9 153.8
CD2 CG CB HB2C 276.5 277.1
HD21 CD2 CG HD22 121.6 122.3
CD2 CG OD1 CB 247.9 247.8
OD1 CG CD2 HD21 329.8 322.2
OD1 CG CD2 HD22 208.2 199.9
CD2 CG OD1 HG 121.5 123.9
OD1 CG CB CA 283.9 277.3
CB CG OD1 HG 233.6 236.0
OD1 CG CB HB1C 43.1 35.8
OD1 CG CB HB2C 164.6 159.1
N CA CB CG 330.6 338.1
CD2 CG CB OD1 111.9 118.0
CB CG CD2 HD21 213.2 204.2
CB CG CD2 HD22 91.6 81.8
CD2 CG CB HG 238.8 241.9
OD1 CG CB HG 126.9 123.9
CB CG OD1 HD1 292.1 173.6
CG CB CA C 215.8 218.7
CG CB CA HA 92.1 97.5
CA CB CG HB1C 240.8 241.4
CA CB CG HB2C 119.2 118.2
HB1C CB CG HB2C 238.4 236.7
N CA CB C 114.8 119.4
N CA CB HA 238.6 240.6
CA CB CG HG 156.9 153.4
CG CB CA HB1C 119.2 118.5
CG CB CA HB2C 240.8 241.7
CB CA C O 72.1 99.3
CB CA C NAR 253.6 279.3
C CA CB HA 123.8 121.2
HB1C CB CA HB2C 121.6 123.2
N CA C CB 249.2 242.2
N CA C HA 125.5 121.1
CB CA C HA 236.3 238.9
C CA CB HB1C 96.6 100.2
C CA CB HB2C 335.0 337.0
O C CA NAR 178.6 180.0
CA C NAR CAL 178.3 180.0
CA C NAR HAR 358.3 0.0
CA C O NAR 181.5 180.0
O C CA HA 195.8 220.4
O C NAR CAL 359.8 0.0
O C NAR HAR 179.8 180.0
CA C NAR O 178.5 180.0
NAR C CA HA 17.2 40.3
C NAR CAL CAX 269.2 180.0
CAL NAR C HAR 180.0 180.0
C NAR CAL HAL1 29.2 300.0
C NAR CAL HAL2 149.1 60.0
C NAR CAL HAR 180.0 180.0
NAR CAL CAX CAF 347.3 90.0
NAR CAL CAX CAE 168.2 270.2
CAX CAL NAR HAL1 240.0 240.0
CAX CAL NAR HAL2 120.1 120.0
HAL1 CAL NAR HAL2 240.1 240.0
CAX CAL NAR HAR 89.2 360.0
NAR CAL CAX HAL1 120.1 120.0
NAR CAL CAX HAL2 239.9 240.0
CAE CAX CAL CAF 180.8 180.2
CAL CAX CAF CAH 181.1 180.0
CAL CAX CAF HAF 1.1 0.0
CAL CAX CAE CAG 178.4 180.0
CAL CAX CAE HAE 358.4 0.0
HAL1 CAL CAX HAL2 119.9 120.0
CAL CAX CAF CAE 180.9 180.2
CAF CAX CAL HAL1 227.2 330.0
CAF CAX CAL HAL2 107.4 210.0
CAF CAX CAE CAG 359.2 0.3
CAF CAX CAE HAE 179.2 180.3
CAX CAF CAH CAY 0.5 359.9
CAH CAF CAX HAF 180.0 180.0
CAX CAF CAH HAH 180.4 179.9
CAL CAX CAE CAF 179.1 179.8
CAE CAX CAL HAL1 48.1 150.2
CAE CAX CAL HAL2 288.2 30.2
CAE CAX CAF CAH 0.2 359.8
CAE CAX CAF HAF 180.2 179.8
CAX CAE CAG CAY 0.6 360.0
CAG CAE CAX HAE 180.0 180.0
CAX CAE CAG HAG 180.6 180.0
CAX CAF CAH HAF 180.0 180.0
CAG CAY CAH CAF 359.4 0.3
CAF CAH CAY CBA 181.1 180.0
CAY CAH CAF HAH 180.0 180.0
CAY CAH CAF HAF 180.4 179.9
CAF CAH CAY HAH 180.0 180.0
CAE CAG CAY CAH 0.0 359.7
CAG CAY CAH CBA 178.3 180.3
CAH CAY CAG HAG 180.1 179.7
CAH CAY CBA OAS 6.7 0.3
CAH CAY CBA OAD 182.3 180.3
CAG CAE CAX CAF 359.2 0.3
CAX CAE CAG HAE 180.0 180.0
CAE CAG CAY CBA 178.3 180.0
CAY CAG CAE HAG 180.0 180.0
CAF CAH CAY CAG 359.4 0.3
CAH CAY CAG CBA 181.8 179.7
CAG CAY CAH HAH 179.4 180.3
CAY CAG CAE HAE 180.6 180.0
CAE CAG CAY HAG 180.0 180.0
CAG CAY CBA OAS 188.4 180.0
CAG CAY CBA OAD 4.0 0.0
CAG CAY CBA CAH 181.7 179.7
CBA CAY CAH HAH 1.2 0.0
CBA CAY CAG HAG 358.3 360.0
OAD CBA CAY OAS 175.6 180.0
CAY CBA OAS CAI 142.9 180.0
CAY CBA OAS OAD 175.5 180.0
CBA OAS CAI HAI1 180.0 300.0
CBA OAS CAI HAI2 300.0 60.0
CBA OAS CAI HAI3 60.0 180.0
CAY CBA OAD OAS 184.6 180.0
OAD CBA OAS CAI 327.4 360.0
HAI1 CAI OAS HAI2 240.0 240.0
HAI1 CAI OAS HAI3 120.0 120.0
HAI2 CAI OAS HAI3 240.0 240.0
HAA1 CAA CAW CAK 182.3 90.1
HAA1 CAA CAW NAQ 0.0 269.8
CAW CAA HAA1 HAA2 120.0 119.9
CAW CAA HAA1 HAA3 240.0 240.0
HAA2 CAA HAA1 HAA3 120.0 120.1
HAA2 CAA CAW CAK 302.3 210.0
HAA2 CAA CAW NAQ 120.0 29.7
CAW CAA HAA2 HAA1 239.9 240.1
CAW CAA HAA2 HAA3 119.9 120.0
HAA1 CAA HAA2 HAA3 240.0 239.9
HAA3 CAA CAW CAK 62.3 330.0
HAA3 CAA CAW NAQ 240.0 149.7
CAW CAA HAA3 HAA1 120.0 120.0
CAW CAA HAA3 HAA2 240.0 240.0
HAA1 CAA HAA3 HAA2 120.0 120.0
HAK CAK CAW NAQ 181.5 180.1
CAW CAK HAK CAZ 180.0 180.1
HAK CAK CAZ OAT 178.9 179.9
HAK CAK CAZ CAM 357.8 0.1
CAZ CAM HAM1 CAU 244.8 240.0
CAZ CAM HAM1 HAM2 122.4 120.0
HAM1 CAM CAU OAB 158.1 240.0
HAM1 CAM CAU N 337.6 60.0
CAU CAM HAM1 HAM2 237.6 240.0
CAZ CAM HAM2 CAU 115.2 120.1
CAZ CAM HAM2 HAM1 237.6 240.0
HAM2 CAM CAU OAB 36.5 120.0
HAM2 CAM CAU N 216.0 300.1
CAU CAM HAM2 HAM1 122.4 119.9
HD21 CD2 N CA 128.3 143.2
N CD2 HD21 CG 244.4 244.5
N CD2 HD21 HD22 122.2 122.2
HD21 CD2 CG OD1 329.8 322.2
HD21 CD2 CG CB 213.2 204.2
CG CD2 HD21 HD22 237.8 237.7
HD21 CD2 CG HG 92.0 86.0
HD22 CD2 N CA 249.9 265.5
N CD2 HD22 CG 115.6 115.4
N CD2 HD22 HD21 237.8 237.7
HD22 CD2 CG OD1 208.2 199.9
HD22 CD2 CG CB 91.6 81.8
CG CD2 HD22 HD21 122.2 122.3
HD22 CD2 CG HG 330.4 323.7
N CA HA CB 115.4 117.7
N CA HA C 236.8 238.9
CB CA HA C 121.5 121.2
HA CA CB HB1C 332.8 339.0
HA CA CB HB2C 211.3 215.8
HA CA C O 195.8 220.4
HA CA C NAR 17.2 40.3
CD2 CG HG OD1 242.9 236.2
CD2 CG HG CB 116.9 112.2
HG CG CD2 HD21 92.0 86.0
HG CG CD2 HD22 330.4 323.7
OD1 CG HG CB 234.1 236.1
HG CG OD1 HD1 58.5 297.6
HG CG CB CA 156.9 153.4
HG CG CB HB1C 276.2 272.0
HG CG CB HB2C 37.7 35.2
HD1 OD1 CG CB 292.1 173.6
HD1 OD1 CG HG 58.5 297.6
CG CB HB1C CA 244.5 246.2
HB1C CB CG HG 276.2 272.0
CG CB HB1C HB2C 122.3 123.2
HB1C CB CA C 96.6 100.2
HB1C CB CA HA 332.8 339.0
CA CB HB1C HB2C 237.8 237.0
CG CB HB2C CA 115.5 113.5
HB2C CB CG HG 37.7 35.2
CG CB HB2C HB1C 237.7 236.7
HB2C CB CA C 335.0 337.0
HB2C CB CA HA 211.3 215.8
CA CB HB2C HB1C 122.2 123.2
C NAR HAR CAL 180.0 180.0
HAR NAR CAL CAX 89.2 360.0
HAR NAR CAL HAL1 209.2 120.0
HAR NAR CAL HAL2 329.1 240.0
NAR CAL HAL1 CAX 239.6 240.0
HAL1 CAL NAR HAR 209.2 120.0
NAR CAL HAL1 HAL2 119.8 120.0
HAL1 CAL CAX CAF 227.2 330.0
HAL1 CAL CAX CAE 48.1 150.2
CAX CAL HAL1 HAL2 240.2 240.0
NAR CAL HAL2 CAX 120.4 120.0
HAL2 CAL NAR HAR 329.1 240.0
NAR CAL HAL2 HAL1 240.2 240.0
HAL2 CAL CAX CAF 107.4 210.0
HAL2 CAL CAX CAE 288.2 30.2
CAX CAL HAL2 HAL1 119.8 120.0
CAX CAF HAF CAH 180.0 180.0
HAF CAF CAH CAY 180.4 179.9
HAF CAF CAH HAH 0.4 359.9
HAE CAE CAX CAF 179.2 180.3
CAX CAE HAE CAG 180.0 180.0
HAE CAE CAG CAY 180.6 180.0
HAE CAE CAG HAG 0.6 0.0
CAF CAH HAH CAY 180.0 180.0
HAH CAH CAF HAF 0.4 359.9
HAH CAH CAY CBA 1.2 0.0
HAG CAG CAY CAH 180.1 179.7
CAE CAG HAG CAY 180.0 180.0
HAG CAG CAE HAE 0.6 0.0
HAG CAG CAY CBA 358.3 360.0
OAS CAI HAI1 HAI2 120.0 120.0
OAS CAI HAI1 HAI3 240.0 240.0
HAI2 CAI HAI1 HAI3 120.0 120.0
OAS CAI HAI2 HAI1 240.0 240.0
OAS CAI HAI2 HAI3 120.0 120.0
HAI1 CAI HAI2 HAI3 240.0 240.0
OAS CAI HAI3 HAI1 120.0 120.0
OAS CAI HAI3 HAI2 240.0 240.0
HAI1 CAI HAI3 HAI2 120.0 120.0