PDB Chemical Component ZRG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ZRG
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CAB |
NAL |
1.470 |
1.466 |
| CAC |
CAP |
1.530 |
1.506 |
| NAL |
C |
1.329 |
1.347 |
| C |
O |
1.231 |
1.213 |
| C |
CA |
1.531 |
1.506 |
| CAP |
OAE |
1.231 |
1.213 |
| CAP |
N |
1.331 |
1.347 |
| CA |
N |
1.471 |
1.465 |
| CA |
CB |
1.532 |
1.531 |
| CG |
CB |
1.529 |
1.530 |
| CG |
CD |
1.531 |
1.529 |
| CD |
NE |
1.472 |
1.465 |
| NE |
CZ |
1.332 |
1.374 |
| CZ |
NH1 |
1.331 |
1.303 |
| CZ |
NH2 |
1.332 |
1.381 |
| NH2 |
CAR |
1.342 |
1.347 |
| CAR |
NAK |
1.331 |
1.348 |
| CAR |
OAF |
1.232 |
1.215 |
| NAK |
CAA |
1.470 |
1.465 |
| CAC |
H1AC |
1.100 |
1.090 |
| CAC |
H2AC |
1.100 |
1.090 |
| CAC |
H3AC |
1.100 |
1.091 |
| N |
HN |
1.000 |
0.970 |
| CA |
HA |
1.100 |
1.090 |
| NAL |
HNAL |
1.000 |
0.970 |
| CAB |
H1AB |
1.100 |
1.089 |
| CAB |
H2AB |
1.100 |
1.090 |
| CAB |
H3AB |
1.100 |
1.090 |
| CB |
H1B |
1.100 |
1.091 |
| CB |
H2B |
1.101 |
1.090 |
| CG |
H1G |
1.100 |
1.091 |
| CG |
H2G |
1.100 |
1.091 |
| CD |
H1D |
1.100 |
1.091 |
| CD |
H2D |
1.100 |
1.090 |
| NE |
HNE |
1.000 |
0.970 |
| NH1 |
HH1 |
1.000 |
0.970 |
| NH2 |
HNH2 |
1.000 |
0.970 |
| NAK |
HNAK |
1.000 |
0.970 |
| CAA |
H1AA |
1.100 |
1.090 |
| CAA |
H2AA |
1.100 |
1.090 |
| CAA |
H3AA |
1.100 |
1.090 |
Bond Angles for ZRG
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAB |
NAL |
HNAL |
121.5 |
120.0 |
| CAC |
CAP |
OAE |
120.9 |
120.0 |
| CAC |
CAP |
N |
115.9 |
120.0 |
| CAP |
CAC |
H1AC |
109.5 |
109.5 |
| CAP |
CAC |
H2AC |
109.4 |
109.5 |
| CAP |
CAC |
H3AC |
109.4 |
109.5 |
| C |
CA |
CB |
110.0 |
109.5 |
| C |
CA |
HA |
109.4 |
109.5 |
| OAE |
CAP |
N |
123.3 |
120.0 |
| CAP |
N |
HN |
118.1 |
120.0 |
| CA |
N |
HN |
118.1 |
120.0 |
| CB |
CA |
HA |
109.4 |
109.4 |
| CA |
CB |
H1B |
108.5 |
109.4 |
| CA |
CB |
H2B |
108.5 |
109.5 |
| CG |
CB |
H1B |
108.5 |
109.4 |
| CG |
CB |
H2B |
108.5 |
109.5 |
| CG |
CD |
NE |
110.7 |
109.5 |
| CD |
CG |
H1G |
109.0 |
109.5 |
| CD |
CG |
H2G |
109.0 |
109.5 |
| CG |
CD |
H1D |
109.1 |
109.5 |
| CG |
CD |
H2D |
109.1 |
109.5 |
| CD |
NE |
CZ |
121.7 |
120.0 |
| NE |
CD |
H1D |
109.1 |
109.5 |
| NE |
CD |
H2D |
109.1 |
109.5 |
| CD |
NE |
HNE |
119.1 |
120.0 |
| NE |
CZ |
NH1 |
119.5 |
120.0 |
| NE |
CZ |
NH2 |
118.5 |
120.0 |
| CZ |
NE |
HNE |
119.1 |
120.0 |
| NH1 |
CZ |
NH2 |
121.6 |
120.0 |
| CZ |
NH1 |
HH1 |
112.0 |
120.0 |
| CZ |
NH2 |
CAR |
125.9 |
120.0 |
| CZ |
NH2 |
HNH2 |
117.1 |
120.0 |
| NH2 |
CAR |
NAK |
116.3 |
120.0 |
| NH2 |
CAR |
OAF |
121.1 |
120.1 |
| CAR |
NH2 |
HNH2 |
117.0 |
120.0 |
| OAF |
CAR |
NAK |
122.2 |
119.9 |
| CAR |
NAK |
CAA |
117.9 |
120.0 |
| CAR |
NAK |
HNAK |
121.0 |
120.0 |
| CAA |
NAK |
HNAK |
121.1 |
120.0 |
| NAK |
CAA |
H1AA |
109.5 |
109.5 |
| NAK |
CAA |
H2AA |
109.5 |
109.5 |
| NAK |
CAA |
H3AA |
109.5 |
109.4 |
| H1AC |
CAC |
H2AC |
109.5 |
109.4 |
| H1AC |
CAC |
H3AC |
109.5 |
109.5 |
| H2AC |
CAC |
H3AC |
109.5 |
109.4 |
| H1AB |
CAB |
H2AB |
109.5 |
109.5 |
| H1AB |
CAB |
H3AB |
109.5 |
109.5 |
| H2AB |
CAB |
H3AB |
109.5 |
109.5 |
| H1B |
CB |
H2B |
110.4 |
109.5 |
| H1G |
CG |
H2G |
109.9 |
109.4 |
| H1D |
CD |
H2D |
109.9 |
109.5 |
| H1AA |
CAA |
H2AA |
109.5 |
109.5 |
| H1AA |
CAA |
H3AA |
109.4 |
109.5 |
| H2AA |
CAA |
H3AA |
109.5 |
109.4 |
Torsion Angles for ZRG
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| OAE |
CAP |
CAC |
N |
180.8 |
180.0 |
| CAC |
CAP |
N |
HN |
179.6 |
360.0 |
| H1AC |
CAC |
CAP |
H2AC |
240.0 |
240.0 |
| H1AC |
CAC |
CAP |
H3AC |
120.0 |
120.0 |
| H2AC |
CAC |
CAP |
H3AC |
240.0 |
240.0 |
| NAL |
C |
CA |
CB |
255.9 |
300.0 |
| NAL |
C |
CA |
HA |
16.1 |
60.0 |
| O |
C |
CA |
CB |
76.6 |
120.0 |
| O |
C |
CA |
HA |
196.8 |
240.0 |
| C |
CA |
N |
HN |
110.8 |
95.0 |
| CB |
CA |
C |
HA |
239.8 |
240.0 |
| C |
CA |
CB |
H1B |
178.4 |
295.0 |
| C |
CA |
CB |
H2B |
298.4 |
55.0 |
| CAC |
CAP |
OAE |
N |
179.2 |
180.0 |
| OAE |
CAP |
CAC |
H1AC |
0.0 |
0.0 |
| OAE |
CAP |
CAC |
H2AC |
120.0 |
120.0 |
| OAE |
CAP |
CAC |
H3AC |
240.0 |
240.0 |
| OAE |
CAP |
N |
HN |
358.8 |
180.0 |
| CAC |
CAP |
N |
OAE |
180.8 |
180.0 |
| N |
CAP |
CAC |
H1AC |
179.2 |
180.0 |
| N |
CAP |
CAC |
H2AC |
299.2 |
300.0 |
| N |
CAP |
CAC |
H3AC |
59.2 |
60.0 |
| CA |
N |
CAP |
HN |
180.0 |
180.0 |
| CAP |
N |
CA |
HN |
180.0 |
180.0 |
| C |
CA |
CB |
HA |
120.2 |
120.0 |
| CB |
CA |
N |
HN |
351.1 |
335.0 |
| CG |
CB |
CA |
H1B |
240.0 |
240.0 |
| CG |
CB |
CA |
H2B |
120.0 |
120.0 |
| H1B |
CB |
CA |
H2B |
240.0 |
240.0 |
| CG |
CB |
CA |
HA |
298.2 |
55.0 |
| CA |
CB |
CG |
H1B |
120.0 |
120.0 |
| CA |
CB |
CG |
H2B |
240.0 |
240.0 |
| H1B |
CB |
CG |
H2B |
120.0 |
120.0 |
| CD |
CG |
CB |
H1B |
61.1 |
60.0 |
| CD |
CG |
CB |
H2B |
301.1 |
300.0 |
| CG |
CD |
NE |
CZ |
117.2 |
180.0 |
| NE |
CD |
CG |
H1D |
240.0 |
240.0 |
| NE |
CD |
CG |
H2D |
120.0 |
120.0 |
| CG |
CD |
NE |
HNE |
297.2 |
0.0 |
| H1G |
CG |
CD |
H2G |
120.0 |
119.9 |
| H1D |
CD |
CG |
H2D |
240.0 |
240.0 |
| NE |
CD |
CG |
H1G |
173.7 |
60.0 |
| NE |
CD |
CG |
H2G |
53.7 |
300.0 |
| CG |
CD |
NE |
H1D |
120.0 |
120.0 |
| CG |
CD |
NE |
H2D |
240.0 |
240.0 |
| CD |
NE |
CZ |
NH1 |
351.0 |
354.6 |
| CD |
NE |
CZ |
NH2 |
178.5 |
174.6 |
| CZ |
NE |
CD |
HNE |
180.0 |
179.9 |
| H1D |
CD |
NE |
H2D |
120.0 |
120.0 |
| CZ |
NE |
CD |
H1D |
357.2 |
60.0 |
| CZ |
NE |
CD |
H2D |
237.2 |
300.0 |
| CD |
NE |
CZ |
HNE |
180.0 |
180.1 |
| NH1 |
CZ |
NE |
NH2 |
172.5 |
180.0 |
| NE |
CZ |
NH1 |
HH1 |
187.7 |
184.9 |
| NE |
CZ |
NH2 |
CAR |
183.1 |
5.3 |
| NE |
CZ |
NH2 |
HNH2 |
3.1 |
185.3 |
| NE |
CZ |
NH1 |
NH2 |
187.8 |
180.0 |
| NH1 |
CZ |
NE |
HNE |
171.0 |
174.6 |
| NH1 |
CZ |
NH2 |
CAR |
10.7 |
185.3 |
| NH1 |
CZ |
NH2 |
HNH2 |
190.8 |
5.3 |
| NE |
CZ |
NH2 |
NH1 |
172.3 |
180.0 |
| NH2 |
CZ |
NE |
HNE |
358.5 |
354.6 |
| NH2 |
CZ |
NH1 |
HH1 |
360.0 |
5.0 |
| CZ |
NH2 |
CAR |
NAK |
181.0 |
174.5 |
| CZ |
NH2 |
CAR |
OAF |
7.9 |
354.4 |
| CAR |
NH2 |
CZ |
HNH2 |
180.0 |
180.0 |
| CZ |
NH2 |
CAR |
HNH2 |
180.0 |
180.0 |
| OAF |
CAR |
NH2 |
NAK |
186.9 |
180.0 |
| NH2 |
CAR |
NAK |
CAA |
201.0 |
180.0 |
| NH2 |
CAR |
NAK |
HNAK |
21.0 |
360.0 |
| NH2 |
CAR |
NAK |
OAF |
187.0 |
180.0 |
| NAK |
CAR |
NH2 |
HNH2 |
0.9 |
354.5 |
| CAA |
NAK |
CAR |
HNAK |
180.0 |
180.0 |
| CAR |
NAK |
CAA |
H1AA |
180.0 |
299.9 |
| CAR |
NAK |
CAA |
H2AA |
300.0 |
60.0 |
| CAR |
NAK |
CAA |
H3AA |
60.0 |
179.9 |
| NH2 |
CAR |
OAF |
NAK |
172.6 |
180.0 |
| OAF |
CAR |
NH2 |
HNH2 |
187.9 |
174.4 |
| OAF |
CAR |
NAK |
CAA |
13.9 |
0.1 |
| OAF |
CAR |
NAK |
HNAK |
193.9 |
180.0 |
| CAR |
NAK |
CAA |
HNAK |
180.0 |
180.0 |
| H1AA |
CAA |
NAK |
H2AA |
240.0 |
239.9 |
| H1AA |
CAA |
NAK |
H3AA |
120.0 |
120.0 |
| H2AA |
CAA |
NAK |
H3AA |
240.0 |
240.0 |
| H1AC |
CAC |
CAP |
OAE |
0.0 |
0.0 |
| H1AC |
CAC |
CAP |
N |
179.2 |
180.0 |
| CAP |
CAC |
H1AC |
H2AC |
120.0 |
120.0 |
| CAP |
CAC |
H1AC |
H3AC |
240.0 |
240.0 |
| H2AC |
CAC |
H1AC |
H3AC |
120.0 |
119.9 |
| H2AC |
CAC |
CAP |
OAE |
120.0 |
120.0 |
| H2AC |
CAC |
CAP |
N |
299.2 |
300.0 |
| CAP |
CAC |
H2AC |
H1AC |
240.0 |
240.0 |
| CAP |
CAC |
H2AC |
H3AC |
119.9 |
120.0 |
| H1AC |
CAC |
H2AC |
H3AC |
240.0 |
240.0 |
| H3AC |
CAC |
CAP |
OAE |
240.0 |
240.0 |
| H3AC |
CAC |
CAP |
N |
59.2 |
60.0 |
| CAP |
CAC |
H3AC |
H1AC |
120.0 |
120.0 |
| CAP |
CAC |
H3AC |
H2AC |
240.0 |
240.0 |
| H1AC |
CAC |
H3AC |
H2AC |
120.0 |
119.9 |
| C |
CA |
HA |
CB |
239.4 |
240.0 |
| HA |
CA |
N |
HN |
230.9 |
215.0 |
| HA |
CA |
CB |
H1B |
58.2 |
175.0 |
| HA |
CA |
CB |
H2B |
178.2 |
295.0 |
| H1AB |
CAB |
NAL |
HNAL |
0.0 |
240.0 |
| H2AB |
CAB |
H1AB |
H3AB |
120.0 |
120.1 |
| H2AB |
CAB |
NAL |
HNAL |
120.0 |
0.1 |
| H1AB |
CAB |
H2AB |
H3AB |
240.0 |
240.0 |
| H3AB |
CAB |
NAL |
HNAL |
240.0 |
120.1 |
| H1AB |
CAB |
H3AB |
H2AB |
120.0 |
120.1 |
| H1B |
CB |
CA |
HA |
58.2 |
175.0 |
| CA |
CB |
H1B |
H2B |
118.8 |
120.0 |
| CG |
CB |
H1B |
H2B |
241.2 |
240.0 |
| H2B |
CB |
CA |
HA |
178.2 |
295.0 |
| CA |
CB |
H2B |
H1B |
241.2 |
240.0 |
| CG |
CB |
H2B |
H1B |
118.8 |
120.0 |
| H1G |
CG |
CB |
H1B |
181.1 |
180.1 |
| H1G |
CG |
CB |
H2B |
61.1 |
60.1 |
| H1G |
CG |
CD |
NE |
173.7 |
60.0 |
| CD |
CG |
H1G |
H2G |
240.5 |
240.0 |
| H1G |
CG |
CD |
H1D |
293.7 |
180.0 |
| H1G |
CG |
CD |
H2D |
53.6 |
300.0 |
| H2G |
CG |
CB |
H1B |
301.0 |
300.0 |
| H2G |
CG |
CB |
H2B |
181.1 |
180.0 |
| H2G |
CG |
CD |
NE |
53.7 |
300.0 |
| CD |
CG |
H2G |
H1G |
119.4 |
120.0 |
| H2G |
CG |
CD |
H1D |
173.7 |
60.0 |
| H2G |
CG |
CD |
H2D |
293.6 |
180.0 |
| CG |
CD |
H1D |
NE |
239.0 |
240.0 |
| H1D |
CD |
CG |
H1G |
293.7 |
180.0 |
| H1D |
CD |
CG |
H2G |
173.7 |
60.0 |
| CG |
CD |
H1D |
H2D |
119.5 |
120.0 |
| H1D |
CD |
NE |
CZ |
357.2 |
60.0 |
| NE |
CD |
H1D |
H2D |
240.5 |
240.0 |
| H1D |
CD |
NE |
HNE |
177.1 |
240.0 |
| CG |
CD |
H2D |
NE |
121.0 |
120.0 |
| H2D |
CD |
CG |
H1G |
53.6 |
300.0 |
| H2D |
CD |
CG |
H2G |
293.6 |
180.0 |
| CG |
CD |
H2D |
H1D |
240.5 |
240.0 |
| H2D |
CD |
NE |
CZ |
237.2 |
300.0 |
| NE |
CD |
H2D |
H1D |
119.5 |
120.0 |
| H2D |
CD |
NE |
HNE |
57.2 |
120.0 |
| CD |
NE |
HNE |
CZ |
180.0 |
179.9 |
| HNE |
NE |
CD |
H1D |
177.1 |
240.0 |
| HNE |
NE |
CD |
H2D |
57.2 |
120.0 |
| HNE |
NE |
CZ |
NH1 |
171.0 |
174.6 |
| HNE |
NE |
CZ |
NH2 |
358.5 |
354.6 |
| HH1 |
NH1 |
CZ |
NH2 |
360.0 |
5.0 |
| CZ |
NH2 |
HNH2 |
CAR |
180.0 |
180.0 |
| HNH2 |
NH2 |
CAR |
NAK |
0.9 |
354.5 |
| HNH2 |
NH2 |
CAR |
OAF |
187.9 |
174.4 |
| CAR |
NAK |
HNAK |
CAA |
180.0 |
180.0 |
| HNAK |
NAK |
CAA |
H1AA |
360.0 |
120.0 |
| HNAK |
NAK |
CAA |
H2AA |
120.0 |
240.0 |
| HNAK |
NAK |
CAA |
H3AA |
240.0 |
360.0 |
| H1AA |
CAA |
NAK |
HNAK |
360.0 |
120.0 |
| NAK |
CAA |
H1AA |
H2AA |
120.0 |
120.0 |
| NAK |
CAA |
H1AA |
H3AA |
240.0 |
240.0 |
| H2AA |
CAA |
H1AA |
H3AA |
120.0 |
120.0 |
| H2AA |
CAA |
NAK |
HNAK |
120.0 |
240.0 |
| NAK |
CAA |
H2AA |
H1AA |
239.9 |
240.0 |
| NAK |
CAA |
H2AA |
H3AA |
120.0 |
120.0 |
| H1AA |
CAA |
H2AA |
H3AA |
240.0 |
240.0 |
| H3AA |
CAA |
NAK |
HNAK |
240.0 |
360.0 |
| NAK |
CAA |
H3AA |
H1AA |
120.0 |
120.0 |
| NAK |
CAA |
H3AA |
H2AA |
240.0 |
240.0 |
| H1AA |
CAA |
H3AA |
H2AA |
120.0 |
120.0 |