PDB Chemical Component ZOT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ZOT
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C14 |
C13 |
1.390 |
1.314 |
C14 |
C1 |
1.388 |
1.473 |
C13 |
C12 |
1.392 |
1.476 |
CL1 |
C1 |
1.706 |
1.736 |
C1 |
C2 |
1.385 |
1.311 |
S1 |
C12 |
1.760 |
1.762 |
S1 |
C11 |
1.744 |
1.761 |
C12 |
C3 |
1.392 |
1.311 |
C2 |
C3 |
1.388 |
1.483 |
C15 |
C11 |
1.390 |
1.316 |
C15 |
C16 |
1.390 |
1.473 |
C3 |
C4 |
1.388 |
1.459 |
C11 |
C10 |
1.389 |
1.471 |
C16 |
C17 |
1.390 |
1.316 |
C4 |
C9 |
1.391 |
1.273 |
C4 |
O1 |
1.361 |
1.362 |
C10 |
C9 |
1.390 |
1.461 |
C10 |
C18 |
1.391 |
1.319 |
C17 |
C18 |
1.389 |
1.472 |
O1 |
C5 |
1.430 |
1.429 |
C6 |
C5 |
1.530 |
1.529 |
C6 |
N1 |
1.468 |
1.469 |
C7 |
N1 |
1.471 |
1.469 |
N1 |
C8 |
1.471 |
1.470 |
C13 |
H1 |
1.080 |
1.081 |
C14 |
H2 |
1.080 |
1.080 |
C15 |
H3 |
1.080 |
1.080 |
C16 |
H4 |
1.080 |
1.080 |
C17 |
H5 |
1.079 |
1.080 |
C18 |
H6 |
1.081 |
1.080 |
C2 |
H7 |
1.080 |
1.080 |
C5 |
H8 |
1.100 |
1.090 |
C5 |
H9 |
1.100 |
1.090 |
C6 |
H10 |
1.100 |
1.090 |
C6 |
H11 |
1.100 |
1.091 |
C7 |
H12 |
1.100 |
1.089 |
C7 |
H13 |
1.100 |
1.090 |
C7 |
H14 |
1.100 |
1.091 |
C8 |
H15 |
1.100 |
1.090 |
C8 |
H16 |
1.100 |
1.089 |
C8 |
H17 |
1.100 |
1.090 |
C9 |
H18 |
1.080 |
1.081 |
Bond Angles for ZOT
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C14 |
C13 |
H1 |
119.8 |
119.7 |
C14 |
C1 |
C2 |
120.2 |
120.0 |
C13 |
C12 |
C3 |
119.6 |
120.3 |
C1 |
C2 |
C3 |
120.3 |
120.8 |
C1 |
C2 |
H7 |
119.9 |
119.6 |
C12 |
C3 |
C2 |
119.8 |
119.0 |
C12 |
C3 |
C4 |
130.3 |
123.3 |
C2 |
C3 |
C4 |
109.8 |
117.7 |
C3 |
C2 |
H7 |
119.8 |
119.6 |
C15 |
C16 |
C17 |
119.9 |
119.9 |
C16 |
C15 |
H3 |
119.8 |
120.0 |
C15 |
C16 |
H4 |
120.1 |
120.1 |
C3 |
C4 |
C9 |
127.6 |
130.6 |
C3 |
C4 |
O1 |
113.4 |
114.7 |
C11 |
C10 |
C9 |
130.3 |
120.6 |
C11 |
C10 |
C18 |
119.6 |
119.6 |
C16 |
C17 |
C18 |
119.7 |
120.0 |
C17 |
C16 |
H4 |
120.1 |
120.0 |
C16 |
C17 |
H5 |
120.2 |
120.0 |
C9 |
C4 |
O1 |
118.9 |
114.7 |
C10 |
C9 |
C4 |
129.5 |
128.5 |
C4 |
C9 |
H18 |
115.2 |
115.8 |
C4 |
O1 |
C5 |
111.5 |
117.0 |
C18 |
C10 |
C9 |
110.0 |
119.9 |
C10 |
C9 |
H18 |
115.2 |
115.8 |
C10 |
C18 |
C17 |
120.5 |
120.2 |
C10 |
C18 |
H6 |
119.7 |
119.9 |
C18 |
C17 |
H5 |
120.1 |
119.9 |
C17 |
C18 |
H6 |
119.7 |
119.9 |
O1 |
C5 |
H8 |
109.6 |
109.5 |
O1 |
C5 |
H9 |
109.6 |
109.4 |
C6 |
C5 |
H8 |
109.6 |
109.5 |
C6 |
C5 |
H9 |
109.6 |
109.5 |
C6 |
N1 |
C7 |
109.3 |
111.0 |
C6 |
N1 |
C8 |
109.1 |
111.0 |
N1 |
C6 |
H10 |
109.1 |
109.5 |
N1 |
C6 |
H11 |
109.0 |
109.4 |
C7 |
N1 |
C8 |
109.6 |
110.9 |
N1 |
C7 |
H12 |
109.5 |
109.5 |
N1 |
C7 |
H13 |
109.4 |
109.5 |
N1 |
C7 |
H14 |
109.5 |
109.4 |
N1 |
C8 |
H15 |
109.5 |
109.4 |
N1 |
C8 |
H16 |
109.5 |
109.5 |
N1 |
C8 |
H17 |
109.5 |
109.5 |
H8 |
C5 |
H9 |
109.5 |
109.4 |
H10 |
C6 |
H11 |
109.4 |
109.4 |
H12 |
C7 |
H13 |
109.5 |
109.5 |
H12 |
C7 |
H14 |
109.5 |
109.5 |
H13 |
C7 |
H14 |
109.4 |
109.4 |
H15 |
C8 |
H16 |
109.5 |
109.4 |
H15 |
C8 |
H17 |
109.4 |
109.4 |
H16 |
C8 |
H17 |
109.5 |
109.5 |
Torsion Angles for ZOT
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C13 |
C14 |
C1 |
C2 |
0.4 |
0.1 |
C14 |
C13 |
C12 |
C3 |
357.2 |
359.8 |
C14 |
C1 |
C2 |
C3 |
359.6 |
0.0 |
C14 |
C1 |
C2 |
H7 |
179.6 |
180.0 |
C13 |
C12 |
C3 |
C2 |
2.8 |
0.3 |
C13 |
C12 |
C3 |
C4 |
179.7 |
180.5 |
CL1 |
C1 |
C2 |
H7 |
0.1 |
0.2 |
C12 |
C3 |
C2 |
C1 |
358.8 |
359.8 |
C1 |
C2 |
C3 |
C4 |
181.3 |
179.6 |
C3 |
C2 |
C1 |
H7 |
180.0 |
180.1 |
C1 |
C2 |
C3 |
C12 |
358.8 |
359.8 |
C2 |
C3 |
C12 |
C4 |
183.1 |
179.9 |
C12 |
C3 |
C2 |
H7 |
178.8 |
179.8 |
C12 |
C3 |
C4 |
C9 |
333.9 |
46.0 |
C12 |
C3 |
C4 |
O1 |
158.1 |
226.1 |
C1 |
C2 |
C3 |
H7 |
180.0 |
179.9 |
C12 |
C3 |
C2 |
C4 |
177.5 |
180.1 |
C2 |
C3 |
C4 |
C9 |
151.1 |
226.2 |
C2 |
C3 |
C4 |
O1 |
335.2 |
46.2 |
C15 |
C11 |
C10 |
C9 |
180.7 |
179.9 |
C15 |
C11 |
C10 |
C18 |
357.0 |
360.0 |
C15 |
C16 |
C17 |
C18 |
359.8 |
359.9 |
C17 |
C16 |
C15 |
H4 |
180.0 |
180.0 |
C15 |
C16 |
C17 |
H5 |
179.9 |
180.0 |
C12 |
C3 |
C4 |
C2 |
182.9 |
179.9 |
C4 |
C3 |
C2 |
H7 |
1.3 |
359.7 |
C9 |
C4 |
C3 |
O1 |
175.8 |
180.0 |
C10 |
C9 |
C4 |
C3 |
1.9 |
358.5 |
C3 |
C4 |
C9 |
H18 |
181.9 |
178.5 |
C3 |
C4 |
O1 |
C5 |
224.8 |
174.8 |
C11 |
C10 |
C9 |
C4 |
23.9 |
317.8 |
C18 |
C10 |
C11 |
C9 |
176.3 |
180.1 |
C11 |
C10 |
C9 |
H18 |
203.9 |
137.9 |
C11 |
C10 |
C18 |
C17 |
1.9 |
360.0 |
C11 |
C10 |
C18 |
H6 |
181.9 |
180.0 |
C17 |
C16 |
C15 |
H3 |
179.0 |
180.0 |
C15 |
C16 |
C17 |
H4 |
180.0 |
180.0 |
C10 |
C18 |
C17 |
C16 |
359.7 |
0.1 |
C18 |
C17 |
C16 |
H5 |
180.0 |
179.9 |
C16 |
C17 |
C18 |
H6 |
179.7 |
180.1 |
C3 |
C4 |
C9 |
O1 |
184.4 |
180.0 |
C9 |
C4 |
O1 |
C5 |
48.6 |
354.8 |
C18 |
C10 |
C9 |
C4 |
207.3 |
137.7 |
C10 |
C9 |
C4 |
H18 |
180.0 |
180.1 |
C3 |
C4 |
O1 |
C9 |
176.2 |
180.0 |
C10 |
C9 |
C4 |
O1 |
177.5 |
178.5 |
O1 |
C4 |
C9 |
H18 |
357.5 |
358.4 |
C4 |
O1 |
C5 |
H8 |
247.2 |
59.9 |
C4 |
O1 |
C5 |
H9 |
7.4 |
300.0 |
C3 |
C4 |
C9 |
C10 |
1.9 |
358.5 |
C11 |
C10 |
C9 |
C18 |
176.6 |
180.1 |
C4 |
C9 |
C10 |
H18 |
180.0 |
179.9 |
C9 |
C10 |
C18 |
C17 |
178.9 |
180.1 |
C9 |
C10 |
C18 |
H6 |
358.9 |
0.1 |
C11 |
C10 |
C18 |
C9 |
183.0 |
179.9 |
C16 |
C17 |
C18 |
C10 |
359.7 |
0.1 |
C18 |
C10 |
C9 |
H18 |
27.4 |
317.8 |
C10 |
C18 |
C17 |
H5 |
179.7 |
180.0 |
C17 |
C18 |
C10 |
H6 |
180.0 |
180.0 |
C18 |
C17 |
C16 |
H4 |
179.9 |
179.9 |
C16 |
C17 |
C18 |
H5 |
180.0 |
180.1 |
C17 |
C18 |
C10 |
C9 |
178.9 |
180.1 |
C10 |
C18 |
C17 |
H6 |
180.0 |
180.0 |
C6 |
C5 |
O1 |
H8 |
240.1 |
120.1 |
C6 |
C5 |
O1 |
H9 |
119.9 |
240.0 |
H8 |
C5 |
O1 |
H9 |
239.8 |
119.9 |
C4 |
O1 |
C5 |
C6 |
127.3 |
180.0 |
O1 |
C5 |
C6 |
H8 |
119.9 |
239.9 |
O1 |
C5 |
C6 |
H9 |
240.1 |
120.0 |
H8 |
C5 |
C6 |
H9 |
120.1 |
240.1 |
N1 |
C6 |
C5 |
H8 |
21.6 |
185.0 |
N1 |
C6 |
C5 |
H9 |
261.4 |
305.0 |
C7 |
N1 |
C6 |
C8 |
240.2 |
236.1 |
C6 |
N1 |
C7 |
H12 |
180.0 |
60.0 |
C6 |
N1 |
C7 |
H13 |
300.0 |
180.0 |
C6 |
N1 |
C7 |
H14 |
60.0 |
300.0 |
C6 |
N1 |
C8 |
H15 |
180.0 |
60.0 |
C6 |
N1 |
C8 |
H16 |
300.0 |
180.0 |
C6 |
N1 |
C8 |
H17 |
60.0 |
300.1 |
H10 |
C6 |
N1 |
H11 |
119.5 |
120.0 |
C6 |
N1 |
C7 |
C8 |
119.5 |
123.9 |
C7 |
N1 |
C6 |
H10 |
58.8 |
306.0 |
C7 |
N1 |
C6 |
H11 |
299.3 |
186.1 |
C7 |
N1 |
C8 |
H15 |
299.6 |
184.0 |
C7 |
N1 |
C8 |
H16 |
59.6 |
303.9 |
C7 |
N1 |
C8 |
H17 |
179.6 |
64.0 |
H12 |
C7 |
N1 |
H13 |
240.0 |
239.9 |
H12 |
C7 |
N1 |
H14 |
120.0 |
120.0 |
H13 |
C7 |
N1 |
H14 |
240.0 |
240.1 |
C6 |
N1 |
C8 |
C7 |
240.4 |
236.1 |
C8 |
N1 |
C6 |
H10 |
178.5 |
69.9 |
C8 |
N1 |
C6 |
H11 |
59.1 |
310.0 |
C8 |
N1 |
C7 |
H12 |
60.5 |
296.0 |
C8 |
N1 |
C7 |
H13 |
180.6 |
56.1 |
C8 |
N1 |
C7 |
H14 |
300.5 |
176.0 |
H15 |
C8 |
N1 |
H16 |
240.0 |
240.1 |
H15 |
C8 |
N1 |
H17 |
120.0 |
119.9 |
H16 |
C8 |
N1 |
H17 |
240.0 |
239.9 |
H1 |
C13 |
C12 |
C3 |
177.2 |
179.8 |
H2 |
C14 |
C13 |
H1 |
1.2 |
0.1 |
H2 |
C14 |
C1 |
C2 |
180.4 |
180.1 |
H3 |
C15 |
C16 |
C17 |
179.0 |
180.0 |
H3 |
C15 |
C16 |
H4 |
359.0 |
359.9 |
C15 |
C16 |
H4 |
C17 |
180.0 |
180.0 |
H4 |
C16 |
C15 |
H3 |
359.0 |
359.9 |
H4 |
C16 |
C17 |
C18 |
179.9 |
179.9 |
H4 |
C16 |
C17 |
H5 |
359.9 |
0.0 |
C16 |
C17 |
H5 |
C18 |
180.0 |
179.9 |
H5 |
C17 |
C16 |
H4 |
359.9 |
0.0 |
H5 |
C17 |
C18 |
H6 |
359.7 |
360.0 |
H6 |
C18 |
C10 |
C9 |
358.9 |
0.1 |
C10 |
C18 |
H6 |
C17 |
180.0 |
180.0 |
H6 |
C18 |
C17 |
H5 |
359.7 |
360.0 |
C1 |
C2 |
H7 |
C3 |
180.0 |
180.1 |
H7 |
C2 |
C3 |
C4 |
1.3 |
359.7 |
O1 |
C5 |
H8 |
H9 |
120.3 |
240.1 |
C6 |
C5 |
H8 |
H9 |
239.8 |
120.0 |
O1 |
C5 |
H9 |
H8 |
239.7 |
120.0 |
C6 |
C5 |
H9 |
H8 |
120.3 |
240.0 |
H10 |
C6 |
C5 |
H8 |
141.8 |
305.1 |
H10 |
C6 |
C5 |
H9 |
21.7 |
65.1 |
H10 |
C6 |
N1 |
C7 |
58.8 |
306.0 |
H10 |
C6 |
N1 |
C8 |
178.5 |
69.9 |
N1 |
C6 |
H10 |
H11 |
240.8 |
240.0 |
H11 |
C6 |
C5 |
H8 |
261.3 |
65.1 |
H11 |
C6 |
C5 |
H9 |
141.1 |
185.0 |
H11 |
C6 |
N1 |
C7 |
299.3 |
186.1 |
H11 |
C6 |
N1 |
C8 |
59.1 |
310.0 |
N1 |
C6 |
H11 |
H10 |
119.2 |
120.0 |
H12 |
C7 |
N1 |
C8 |
60.5 |
296.0 |
N1 |
C7 |
H12 |
H13 |
120.0 |
120.1 |
N1 |
C7 |
H12 |
H14 |
240.0 |
240.0 |
H13 |
C7 |
H12 |
H14 |
120.0 |
120.0 |
H13 |
C7 |
N1 |
C8 |
180.6 |
56.1 |
N1 |
C7 |
H13 |
H12 |
240.0 |
239.9 |
N1 |
C7 |
H13 |
H14 |
120.0 |
119.9 |
H12 |
C7 |
H13 |
H14 |
240.0 |
240.0 |
H14 |
C7 |
N1 |
C8 |
300.5 |
176.0 |
N1 |
C7 |
H14 |
H12 |
120.0 |
120.0 |
N1 |
C7 |
H14 |
H13 |
240.0 |
240.0 |
H12 |
C7 |
H14 |
H13 |
120.0 |
120.0 |
N1 |
C8 |
H15 |
H16 |
120.0 |
120.0 |
N1 |
C8 |
H15 |
H17 |
240.0 |
240.0 |
H16 |
C8 |
H15 |
H17 |
120.0 |
120.0 |
N1 |
C8 |
H16 |
H15 |
240.0 |
240.0 |
N1 |
C8 |
H16 |
H17 |
120.0 |
120.1 |
H15 |
C8 |
H16 |
H17 |
240.1 |
240.0 |
N1 |
C8 |
H17 |
H15 |
120.0 |
120.0 |
N1 |
C8 |
H17 |
H16 |
240.0 |
239.9 |
H15 |
C8 |
H17 |
H16 |
120.0 |
120.0 |
H18 |
C9 |
C4 |
O1 |
357.5 |
358.4 |
C10 |
C9 |
H18 |
C4 |
180.0 |
179.9 |