PDB Chemical Component ZMA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ZMA
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C7 |
C1 |
1.390 |
1.383 |
| C1 |
C2 |
1.389 |
1.381 |
| C1 |
H1 |
1.080 |
1.080 |
| C2 |
C3 |
1.390 |
1.387 |
| C2 |
H2 |
1.080 |
1.080 |
| C5 |
C3 |
1.389 |
1.387 |
| C3 |
O4 |
1.359 |
1.359 |
| O4 |
HO4 |
0.950 |
0.967 |
| C6 |
C5 |
1.388 |
1.382 |
| C5 |
H5 |
1.080 |
1.080 |
| C7 |
C6 |
1.389 |
1.383 |
| C6 |
H6 |
1.079 |
1.080 |
| C8 |
C7 |
1.528 |
1.507 |
| C9 |
C8 |
1.526 |
1.530 |
| C8 |
H8 |
1.100 |
1.091 |
| C8 |
H8A |
1.100 |
1.090 |
| N10 |
C9 |
1.468 |
1.465 |
| C9 |
H9 |
1.100 |
1.090 |
| C9 |
H9A |
1.100 |
1.090 |
| C11 |
N10 |
1.329 |
1.380 |
| N10 |
HN10 |
1.000 |
0.970 |
| N12 |
C11 |
1.343 |
1.323 |
| C11 |
N13 |
1.343 |
1.335 |
| C18 |
N12 |
1.343 |
1.341 |
| C14 |
N13 |
1.338 |
1.321 |
| N16 |
C14 |
1.393 |
1.364 |
| C14 |
N15 |
1.331 |
1.370 |
| N15 |
HN15 |
1.000 |
0.970 |
| N15 |
HN1A |
1.000 |
0.971 |
| N17 |
N16 |
1.232 |
1.400 |
| C18 |
N16 |
1.394 |
1.371 |
| C20 |
N17 |
1.335 |
1.319 |
| N19 |
C18 |
1.328 |
1.322 |
| C20 |
N19 |
1.334 |
1.339 |
| C21 |
C20 |
1.389 |
1.478 |
| C22 |
C21 |
1.329 |
1.359 |
| O25 |
C21 |
1.361 |
1.347 |
| C23 |
C22 |
1.333 |
1.409 |
| C22 |
H22 |
1.080 |
1.080 |
| C23 |
C24 |
1.333 |
1.348 |
| C23 |
H23 |
1.080 |
1.080 |
| C24 |
O25 |
1.368 |
1.343 |
| C24 |
H24 |
1.080 |
1.080 |
Bond Angles for ZMA
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C7 |
C1 |
H1 |
120.0 |
120.0 |
| C2 |
C1 |
H1 |
120.0 |
119.9 |
| C1 |
C2 |
C3 |
120.0 |
119.9 |
| C1 |
C2 |
H2 |
120.0 |
120.1 |
| C3 |
C2 |
H2 |
120.0 |
120.0 |
| C2 |
C3 |
O4 |
120.3 |
120.1 |
| C3 |
O4 |
HO4 |
109.5 |
114.0 |
| C6 |
C5 |
H5 |
120.0 |
120.0 |
| C7 |
C6 |
H6 |
120.0 |
120.0 |
| C9 |
C8 |
H8 |
109.4 |
109.5 |
| C9 |
C8 |
H8A |
109.4 |
109.5 |
| H8 |
C8 |
H8A |
109.5 |
109.5 |
| N10 |
C9 |
H9 |
109.1 |
109.5 |
| N10 |
C9 |
H9A |
108.7 |
109.4 |
| H9 |
C9 |
H9A |
110.5 |
109.5 |
| C11 |
N10 |
HN10 |
107.6 |
120.0 |
| N12 |
C11 |
N13 |
121.2 |
121.2 |
| C14 |
N15 |
HN15 |
109.5 |
120.0 |
| C14 |
N15 |
HN1A |
109.4 |
119.9 |
| HN15 |
N15 |
HN1A |
109.5 |
120.0 |
| C23 |
C22 |
H22 |
126.0 |
126.6 |
| C24 |
C23 |
H23 |
125.4 |
126.5 |
| C23 |
C24 |
O25 |
107.7 |
108.6 |
| C23 |
C24 |
H24 |
126.1 |
125.7 |
| O25 |
C24 |
H24 |
126.1 |
125.7 |
Torsion Angles for ZMA
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
C7 |
H1 |
180.0 |
179.7 |
| C7 |
C1 |
C2 |
H2 |
179.7 |
180.3 |
| C7 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
| C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
| C1 |
C2 |
C3 |
O4 |
180.0 |
180.0 |
| H1 |
C1 |
C2 |
C3 |
179.7 |
179.9 |
| H1 |
C1 |
C2 |
H2 |
359.7 |
360.0 |
| C3 |
C2 |
C1 |
H1 |
179.7 |
179.9 |
| C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
| C2 |
C3 |
O4 |
HO4 |
328.5 |
90.0 |
| H2 |
C2 |
C1 |
H1 |
359.7 |
360.0 |
| C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
| H2 |
C2 |
C3 |
O4 |
0.0 |
0.0 |
| C5 |
C3 |
C2 |
H2 |
179.9 |
180.0 |
| C5 |
C3 |
O4 |
HO4 |
148.6 |
270.0 |
| O4 |
C3 |
C2 |
H2 |
0.0 |
0.0 |
| C6 |
C7 |
C1 |
H1 |
180.6 |
179.8 |
| C7 |
C6 |
C5 |
H5 |
180.1 |
179.7 |
| H6 |
C6 |
C5 |
H5 |
0.1 |
0.0 |
| C8 |
C7 |
C1 |
H1 |
359.5 |
0.3 |
| C8 |
C7 |
C6 |
H6 |
0.7 |
359.8 |
| H8 |
C8 |
C9 |
H8A |
120.0 |
120.1 |
| C9 |
C8 |
H8 |
H8A |
240.0 |
240.0 |
| C9 |
C8 |
H8A |
H8 |
120.0 |
120.0 |
| N10 |
C9 |
C8 |
H8 |
63.8 |
60.0 |
| N10 |
C9 |
C8 |
H8A |
303.8 |
300.0 |
| H9 |
C9 |
N10 |
H9A |
120.5 |
120.0 |
| H9 |
C9 |
C8 |
H8 |
183.9 |
180.1 |
| H9 |
C9 |
C8 |
H8A |
63.8 |
60.0 |
| N10 |
C9 |
H9 |
H9A |
240.6 |
240.0 |
| H9A |
C9 |
C8 |
H8 |
304.4 |
300.1 |
| H9A |
C9 |
C8 |
H8A |
184.4 |
180.0 |
| N10 |
C9 |
H9A |
H9 |
119.7 |
120.0 |
| C11 |
N10 |
C9 |
H9 |
331.6 |
60.0 |
| C11 |
N10 |
C9 |
H9A |
211.1 |
300.0 |
| HN10 |
N10 |
C9 |
H9 |
91.6 |
240.1 |
| HN10 |
N10 |
C9 |
H9A |
331.1 |
120.0 |
| N12 |
C11 |
N10 |
HN10 |
58.5 |
0.2 |
| N13 |
C11 |
N10 |
HN10 |
240.0 |
179.9 |
| N16 |
C14 |
N15 |
HN15 |
201.5 |
180.0 |
| N16 |
C14 |
N15 |
HN1A |
321.5 |
0.1 |
| HN15 |
N15 |
C14 |
HN1A |
240.0 |
180.0 |
| C14 |
N15 |
HN15 |
HN1A |
120.0 |
180.0 |
| C14 |
N15 |
HN1A |
HN15 |
240.0 |
180.0 |
| C24 |
C23 |
C22 |
H22 |
180.0 |
180.0 |
| O25 |
C24 |
C23 |
H24 |
180.0 |
179.6 |
| H23 |
C23 |
C22 |
H22 |
0.0 |
0.0 |
| H23 |
C23 |
C24 |
O25 |
180.0 |
179.7 |
| H23 |
C23 |
C24 |
H24 |
0.0 |
0.1 |
| O25 |
C24 |
C23 |
H23 |
180.0 |
179.7 |
| C23 |
C24 |
O25 |
H24 |
180.0 |
180.4 |
| H24 |
C24 |
C23 |
H23 |
0.0 |
0.1 |
| C23 |
C24 |
H24 |
O25 |
180.0 |
179.6 |