PDB Chemical Component ZGE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ZGE
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N6 |
C12 |
1.354 |
1.304 |
| C11 |
C10 |
1.512 |
1.507 |
| O8 |
C8 |
1.419 |
1.429 |
| N5 |
C10 |
1.334 |
1.347 |
| N5 |
C5 |
1.492 |
1.465 |
| O9 |
C9 |
1.448 |
1.429 |
| C12 |
N7 |
1.292 |
1.375 |
| C12 |
N4 |
1.375 |
1.375 |
| C10 |
O10 |
1.230 |
1.213 |
| C8 |
C9 |
1.551 |
1.530 |
| C8 |
C7 |
1.521 |
1.530 |
| C4 |
C5 |
1.544 |
1.532 |
| C4 |
N4 |
1.464 |
1.465 |
| C4 |
C3 |
1.534 |
1.504 |
| C6 |
C7 |
1.540 |
1.529 |
| C6 |
C5 |
1.543 |
1.535 |
| C6 |
O6 |
1.447 |
1.429 |
| C7 |
O7 |
1.439 |
1.429 |
| C3 |
F1 |
1.335 |
1.351 |
| C3 |
C2 |
1.366 |
1.331 |
| O6 |
C2 |
1.426 |
1.358 |
| C2 |
C1 |
1.499 |
1.468 |
| C1 |
O1B |
1.266 |
1.349 |
| C1 |
O1A |
1.257 |
1.216 |
| C11 |
H1 |
1.100 |
1.090 |
| C11 |
H2 |
1.100 |
1.090 |
| C11 |
H3 |
1.100 |
1.089 |
| N5 |
H4 |
1.000 |
0.970 |
| C5 |
H5 |
1.100 |
1.090 |
| C4 |
H6 |
1.100 |
1.090 |
| N4 |
H7 |
1.000 |
0.970 |
| N7 |
H8 |
1.000 |
0.970 |
| N7 |
H9 |
1.000 |
0.970 |
| N6 |
H10 |
1.000 |
0.970 |
| C6 |
H11 |
1.100 |
1.091 |
| C7 |
H13 |
1.100 |
1.090 |
| O7 |
H14 |
0.950 |
0.967 |
| C8 |
H15 |
1.100 |
1.090 |
| O8 |
H16 |
0.950 |
0.967 |
| C9 |
H17 |
1.100 |
1.090 |
| C9 |
H18 |
1.100 |
1.090 |
| O9 |
H19 |
0.950 |
0.967 |
| O1B |
HO1B |
0.950 |
0.967 |
Bond Angles for ZGE
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O8 |
C8 |
C9 |
109.3 |
109.4 |
| O8 |
C8 |
H15 |
109.3 |
109.4 |
| C5 |
N5 |
H4 |
119.3 |
120.0 |
| N5 |
C5 |
H5 |
112.3 |
109.7 |
| O9 |
C9 |
H17 |
109.0 |
109.5 |
| O9 |
C9 |
H18 |
109.0 |
109.5 |
| C12 |
N7 |
H8 |
120.0 |
120.0 |
| C12 |
N7 |
H9 |
120.0 |
120.0 |
| C12 |
N4 |
H7 |
117.7 |
120.0 |
| C9 |
C8 |
H15 |
107.6 |
109.5 |
| C8 |
C9 |
H17 |
109.0 |
109.4 |
| C8 |
C9 |
H18 |
109.0 |
109.5 |
| C8 |
C7 |
H13 |
109.2 |
109.5 |
| C4 |
C5 |
H5 |
111.4 |
109.7 |
| N4 |
C4 |
C3 |
116.0 |
109.5 |
| N4 |
C4 |
H6 |
107.4 |
109.4 |
| C4 |
N4 |
H7 |
117.7 |
120.0 |
| C4 |
C3 |
F1 |
118.7 |
118.9 |
| C4 |
C3 |
C2 |
123.0 |
122.2 |
| C3 |
C4 |
H6 |
106.6 |
109.5 |
| O6 |
C6 |
C7 |
106.3 |
109.7 |
| C6 |
C7 |
O7 |
106.8 |
109.5 |
| C7 |
C6 |
H11 |
107.5 |
109.7 |
| C6 |
C7 |
H13 |
109.0 |
109.5 |
| C6 |
C5 |
H5 |
111.5 |
109.6 |
| C6 |
O6 |
C2 |
121.5 |
117.5 |
| O6 |
C6 |
H11 |
108.7 |
109.7 |
| O7 |
C7 |
H13 |
110.4 |
109.4 |
| C7 |
O7 |
H14 |
109.5 |
114.0 |
| F1 |
C3 |
C2 |
117.6 |
118.9 |
| C3 |
C2 |
O6 |
118.0 |
122.9 |
| C3 |
C2 |
C1 |
125.6 |
118.6 |
| O6 |
C2 |
C1 |
116.2 |
118.5 |
| C2 |
C1 |
O1B |
118.0 |
120.0 |
| C2 |
C1 |
O1A |
122.4 |
120.0 |
| O1B |
C1 |
O1A |
119.5 |
120.0 |
| C1 |
O1B |
HO1B |
109.5 |
117.0 |
| H1 |
C11 |
H2 |
109.5 |
109.5 |
| H1 |
C11 |
H3 |
109.4 |
109.5 |
| H2 |
C11 |
H3 |
109.4 |
109.5 |
| H8 |
N7 |
H9 |
120.0 |
120.0 |
| H17 |
C9 |
H18 |
109.4 |
109.5 |
Torsion Angles for ZGE
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N6 |
C12 |
N7 |
H8 |
180.8 |
180.0 |
| N6 |
C12 |
N7 |
H9 |
0.8 |
0.1 |
| N6 |
C12 |
N4 |
H7 |
175.9 |
360.0 |
| C9 |
C8 |
O8 |
H15 |
242.4 |
240.0 |
| O8 |
C8 |
C9 |
H17 |
176.1 |
185.0 |
| O8 |
C8 |
C9 |
H18 |
56.7 |
304.9 |
| O8 |
C8 |
C7 |
H13 |
65.1 |
60.0 |
| C4 |
C5 |
N5 |
H5 |
237.0 |
239.4 |
| C6 |
C5 |
N5 |
H5 |
122.5 |
120.5 |
| O9 |
C9 |
C8 |
H15 |
177.8 |
305.0 |
| C8 |
C9 |
O9 |
H17 |
239.7 |
120.0 |
| C8 |
C9 |
O9 |
H18 |
120.3 |
240.0 |
| H17 |
C9 |
O9 |
H18 |
240.6 |
120.0 |
| N7 |
C12 |
N4 |
H7 |
356.7 |
180.0 |
| H8 |
N7 |
C12 |
H9 |
180.0 |
179.9 |
| C12 |
N4 |
C4 |
C3 |
140.6 |
85.0 |
| C12 |
N4 |
C4 |
H6 |
21.5 |
325.0 |
| C4 |
N4 |
C12 |
H7 |
180.0 |
180.0 |
| O8 |
C8 |
C9 |
H15 |
118.7 |
119.9 |
| O9 |
C9 |
C8 |
H17 |
120.3 |
240.0 |
| O9 |
C9 |
C8 |
H18 |
239.7 |
120.0 |
| C9 |
C8 |
C7 |
H13 |
303.1 |
300.0 |
| H17 |
C9 |
C8 |
H18 |
119.4 |
240.0 |
| C8 |
C7 |
C6 |
H11 |
57.5 |
64.5 |
| C6 |
C7 |
C8 |
H13 |
237.2 |
240.0 |
| O7 |
C7 |
C8 |
H13 |
119.2 |
120.0 |
| C8 |
C7 |
O7 |
H14 |
180.0 |
60.0 |
| C4 |
C5 |
N5 |
H4 |
71.8 |
94.4 |
| N5 |
C5 |
C4 |
H5 |
123.5 |
120.6 |
| C6 |
C5 |
C4 |
H5 |
238.1 |
240.4 |
| C12 |
N4 |
C4 |
H7 |
180.0 |
180.0 |
| N4 |
C4 |
C5 |
H5 |
305.3 |
312.4 |
| N4 |
C4 |
C3 |
F1 |
311.5 |
317.6 |
| N4 |
C4 |
C3 |
C2 |
141.1 |
137.6 |
| C3 |
C4 |
N4 |
H6 |
119.2 |
120.0 |
| C3 |
C4 |
C5 |
H5 |
74.0 |
72.4 |
| N4 |
C4 |
C3 |
H6 |
240.4 |
240.0 |
| C3 |
C4 |
N4 |
H7 |
320.6 |
265.0 |
| F1 |
C3 |
C4 |
C2 |
170.4 |
180.1 |
| C4 |
C3 |
C2 |
O6 |
7.6 |
359.6 |
| C4 |
C3 |
C2 |
C1 |
181.6 |
179.6 |
| C8 |
C7 |
C6 |
H13 |
122.9 |
120.0 |
| C7 |
C6 |
C5 |
H5 |
57.9 |
63.2 |
| C7 |
C6 |
O6 |
C2 |
195.7 |
192.4 |
| O6 |
C6 |
C7 |
H11 |
243.7 |
239.4 |
| O7 |
C7 |
C6 |
H13 |
240.8 |
240.0 |
| C6 |
C7 |
O7 |
H14 |
56.7 |
300.0 |
| C6 |
C5 |
N5 |
H4 |
317.3 |
335.5 |
| N5 |
C5 |
C6 |
H5 |
237.0 |
239.5 |
| C4 |
C5 |
C6 |
H5 |
121.9 |
119.7 |
| O6 |
C6 |
C7 |
O7 |
59.1 |
63.9 |
| C7 |
C6 |
O6 |
H11 |
115.5 |
120.6 |
| O6 |
C6 |
C7 |
H13 |
178.3 |
183.9 |
| O6 |
C6 |
C5 |
H5 |
296.7 |
303.4 |
| C3 |
C2 |
O6 |
C6 |
3.5 |
16.7 |
| C6 |
O6 |
C2 |
C1 |
188.9 |
196.7 |
| C8 |
C7 |
O7 |
H13 |
241.6 |
240.0 |
| O7 |
C7 |
C6 |
H11 |
175.4 |
184.5 |
| C6 |
C7 |
O7 |
H13 |
118.3 |
120.0 |
| C4 |
C3 |
F1 |
C2 |
189.1 |
179.9 |
| F1 |
C3 |
C4 |
H6 |
71.1 |
77.6 |
| F1 |
C3 |
C2 |
O6 |
197.1 |
179.5 |
| F1 |
C3 |
C2 |
C1 |
11.1 |
359.6 |
| C4 |
C3 |
C2 |
F1 |
170.5 |
180.1 |
| C2 |
C3 |
C4 |
H6 |
260.7 |
257.5 |
| C6 |
O6 |
C2 |
C3 |
3.5 |
16.7 |
| O6 |
C2 |
C3 |
C1 |
186.1 |
180.0 |
| C3 |
C2 |
C1 |
O1B |
194.7 |
180.0 |
| C3 |
C2 |
C1 |
O1A |
11.4 |
0.0 |
| C2 |
O6 |
C6 |
C7 |
195.7 |
192.4 |
| C2 |
O6 |
C6 |
H11 |
80.2 |
71.8 |
| C3 |
C2 |
O6 |
C1 |
174.5 |
180.0 |
| O6 |
C2 |
C1 |
O1B |
8.8 |
360.0 |
| O6 |
C2 |
C1 |
O1A |
185.5 |
180.0 |
| C3 |
C2 |
C1 |
O6 |
186.0 |
180.0 |
| O1B |
C1 |
C2 |
O1A |
183.3 |
180.0 |
| C2 |
C1 |
O1B |
HO1B |
176.8 |
180.0 |
| C2 |
C1 |
O1B |
O1A |
176.8 |
180.0 |
| C2 |
C1 |
O1A |
O1B |
183.3 |
180.0 |
| O1A |
C1 |
O1B |
HO1B |
0.0 |
359.9 |
| H2 |
C11 |
H1 |
H3 |
119.9 |
120.0 |
| H1 |
C11 |
H2 |
H3 |
240.1 |
240.0 |
| H1 |
C11 |
H3 |
H2 |
120.0 |
120.0 |
| H4 |
N5 |
C5 |
H5 |
194.8 |
215.0 |
| H5 |
C5 |
N5 |
H4 |
194.8 |
215.0 |
| H6 |
C4 |
C5 |
H5 |
190.3 |
192.4 |
| N4 |
C4 |
H6 |
C3 |
125.0 |
120.0 |
| H6 |
C4 |
N4 |
H7 |
201.5 |
145.0 |
| H6 |
C4 |
C3 |
F1 |
71.1 |
77.6 |
| H6 |
C4 |
C3 |
C2 |
260.7 |
257.5 |
| H7 |
N4 |
C4 |
C3 |
320.6 |
265.0 |
| H7 |
N4 |
C4 |
H6 |
201.5 |
145.0 |
| C12 |
N7 |
H8 |
H9 |
180.0 |
180.1 |
| C12 |
N7 |
H9 |
H8 |
180.0 |
179.9 |
| O6 |
C6 |
H11 |
C7 |
114.7 |
120.6 |
| H11 |
C6 |
C7 |
O7 |
175.4 |
184.5 |
| H11 |
C6 |
C7 |
H13 |
294.6 |
304.5 |
| H11 |
C6 |
C5 |
H5 |
177.7 |
183.7 |
| H11 |
C6 |
O6 |
C2 |
80.2 |
71.8 |
| C6 |
C7 |
H13 |
O7 |
243.0 |
240.0 |
| H13 |
C7 |
C6 |
H11 |
294.6 |
304.5 |
| H13 |
C7 |
O7 |
H14 |
298.4 |
180.0 |
| H14 |
O7 |
C7 |
H13 |
298.4 |
180.0 |
| O8 |
C8 |
H15 |
C9 |
241.4 |
240.1 |
| H15 |
C8 |
C9 |
H17 |
57.4 |
65.0 |
| H15 |
C8 |
C9 |
H18 |
298.1 |
185.0 |
| H15 |
C8 |
C7 |
H13 |
183.4 |
180.0 |
| H16 |
O8 |
C8 |
C9 |
180.0 |
60.1 |
| H16 |
O8 |
C8 |
H15 |
297.6 |
180.0 |
| O9 |
C9 |
H17 |
H18 |
119.1 |
240.0 |
| H17 |
C9 |
C8 |
H15 |
57.4 |
65.0 |
| C8 |
C9 |
H17 |
H18 |
240.9 |
120.0 |
| O9 |
C9 |
H18 |
H17 |
240.9 |
120.0 |
| H18 |
C9 |
C8 |
H15 |
298.1 |
185.0 |
| C8 |
C9 |
H18 |
H17 |
119.1 |
240.0 |
| H19 |
O9 |
C9 |
H17 |
300.3 |
60.0 |
| H19 |
O9 |
C9 |
H18 |
59.7 |
300.0 |
| HO1B |
O1B |
C1 |
O1A |
0.0 |
359.9 |